RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 ATG4BQ9Y4P1 393 aa12.91□□□□□ -0.34
NUMB-209ENST00000554315 ASB4Q9Y574 426 aa12.91□□□□□ -0.34
NUMB-209ENST00000554315 ATRXP46100 2492 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 SAGE2PA6NJ88 616 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 A8MUA0 341 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 TM9SF1O15321 606 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 NPHS1O60500 1241 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 EEDO75530 441 aaKnown RBP12.9□□□□□ -0.34
NUMB-209ENST00000554315 CHEK2O96017 543 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 ALDH3A1P30838 453 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 MAPK12P53778 367 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 TRA2BP62995 288 aaKnown RBP12.9□□□□□ -0.34
NUMB-209ENST00000554315 TNFRSF17Q02223 184 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 GALNT1Q10472 559 aaPredicted RBP12.9□□□□□ -0.34
NUMB-209ENST00000554315 PCLAFQ15004 111 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 MEP1AQ16819 746 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 LINC00696Q6ZRV3 163 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 RBMXL3Q8N7X1 1067 aaKnown RBP12.9□□□□□ -0.34
NUMB-209ENST00000554315 B3GNT7Q8NFL0 401 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 CHTF18Q8WVB6 975 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 PELOQ9BRX2 385 aaKnown RBP12.9□□□□□ -0.34
NUMB-209ENST00000554315 GATA5Q9BWX5 397 aaPredicted RBP12.9□□□□□ -0.34
NUMB-209ENST00000554315 ZNF717Q9BY31 904 aaPredicted RBP12.9□□□□□ -0.34
NUMB-209ENST00000554315 MRPL1Q9BYD6 325 aaKnown RBP12.9□□□□□ -0.34
NUMB-209ENST00000554315 KCNK9Q9NPC2 374 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 RRAGDQ9NQL2 400 aaPredicted RBP12.9□□□□□ -0.34
NUMB-209ENST00000554315 SLC17A7Q9P2U7 560 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 TIMM22Q9Y584 194 aa12.9□□□□□ -0.34
NUMB-209ENST00000554315 TTLL8A6PVC2 850 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 UBFD1O14562 309 aaKnown RBP12.89□□□□□ -0.35
NUMB-209ENST00000554315 MYO1DO94832 1006 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 GPR75O95800 540 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 FGF4P08620 206 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 CLCN2P51788 898 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 HNRNPFP52597 415 aaKnown RBP12.89□□□□□ -0.35
NUMB-209ENST00000554315 ARG2P78540 354 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 TLR1Q15399 786 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 IMPG1Q17R60 797 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 SPIN4Q56A73 249 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 TNFAIP8L3Q5GJ75 292 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 COMMD6Q7Z4G1 85 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 CLNKQ7Z7G1 428 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 NUDCD3Q8IVD9 361 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 LGI4Q8N135 537 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 SIRT6Q8N6T7 355 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 MORN4Q8NDC4 146 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 TMEM52Q8NDY8 209 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 OR14A16Q8NHC5 309 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 SUN3Q8TAQ9 357 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 ELP5Q8TE02 316 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 METTL2AQ96IZ6 378 aaKnown RBP12.89□□□□□ -0.35
NUMB-209ENST00000554315 CSF3RQ99062 836 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 FAIM2Q9BWQ8 316 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 DEFB126Q9BYW3 111 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 ILKAPQ9H0C8 392 aaPredicted RBP12.89□□□□□ -0.35
NUMB-209ENST00000554315 ARGLU1Q9NWB6 273 aaPredicted RBP12.89□□□□□ -0.35
NUMB-209ENST00000554315 SPTA1P02549 2419 aa12.89□□□□□ -0.35
NUMB-209ENST00000554315 A0A1W2PR48 441 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 BIRC5O15392 142 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 TMPRSS11DO60235 418 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 LDB3O75112 727 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 ZWINTO95229 277 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 BPGMP07738 259 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 NR2F6P10588 404 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 SOX11P35716 441 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 HNRNPH2P55795 449 aaKnown RBP12.88□□□□□ -0.35
NUMB-209ENST00000554315 ACSM2AQ08AH3 577 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 TBL3Q12788 808 aaKnown RBP12.88□□□□□ -0.35
NUMB-209ENST00000554315 NADK2Q4G0N4 442 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 SPDYAQ5MJ70 313 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 ACER2Q5QJU3 275 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 ACSM2BQ68CK6 577 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 Q6ZS92 163 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 TRIM46Q7Z4K8 759 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 CLYBLQ8N0X4 340 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 NFAM1Q8NET5 270 aaPredicted RBP12.88□□□□□ -0.35
NUMB-209ENST00000554315 PPP1R14CQ8TAE6 165 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 ANKRD9Q96BM1 317 aaPredicted RBP12.88□□□□□ -0.35
NUMB-209ENST00000554315 VMP1Q96GC9 406 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 DGAT2Q96PD7 388 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 MFRPQ9BY79 579 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 RNF32Q9H0A6 362 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 PFDN4Q9NQP4 134 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 PPIEQ9UNP9 301 aaKnown RBP12.88□□□□□ -0.35
NUMB-209ENST00000554315 BOD1L1Q8NFC6 3051 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 PCSK5Q92824 1860 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 C1orf226A1L170 272 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 SLC28A1O00337 649 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 AZIN1O14977 448 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 ZFAND5O76080 213 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 SNUPNO95149 360 aaKnown RBP12.88□□□□□ -0.35
NUMB-209ENST00000554315 GBAP04062 536 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 CREB1P16220 341 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 TPP2P29144 1249 aaPredicted RBP12.88□□□□□ -0.35
NUMB-209ENST00000554315 GSTM5P46439 218 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 PLEKHN1Q494U1 663 aaPredicted RBP12.88□□□□□ -0.35
NUMB-209ENST00000554315 C18orf63Q68DL7 685 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 SLC6A19Q695T7 634 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 OR52E8Q6IFG1 317 aa12.88□□□□□ -0.35
NUMB-209ENST00000554315 RPS19BP1Q86WX3 136 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms