RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 GCKP35557 465 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 RPL21P46778 160 aaKnown RBP7.54□□□□□ -1.2
ACTN1-212ENST00000554158 DNASE1L1P49184 302 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 HNMTP50135 292 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 HK2P52789 917 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 PLA2G16P53816 162 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 RNF4P78317 190 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 SERTAD2Q14140 314 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 TSNAXIP1Q2TAA8 658 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 DEFB113Q30KQ7 82 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 XKR6Q5GH73 641 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 SLC22A10Q63ZE4 541 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 FAM45BPQ6NSW5 357 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 TMIGD1Q6UXZ0 262 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 C16orf47Q6ZP98 133 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-212ENST00000554158 Q71RC1 249 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-212ENST00000554158 CAND1Q86VP6 1230 aaKnown RBP7.54□□□□□ -1.2
ACTN1-212ENST00000554158 SCUBE1Q8IWY4 988 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 KLHDC8AQ8IYD2 350 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 PM20D2Q8IYS1 436 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 CCDC116Q8IYX3 515 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 C2CD4AQ8NCU7 369 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-212ENST00000554158 FAM13CQ8NE31 585 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 FAM45AQ8TCE6 357 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 SLCO2A1Q92959 643 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 SCYL1Q96KG9 808 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 ART5Q96L15 291 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 SERPINB12Q96P63 405 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 OR4K3Q96R72 315 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 SERINC2Q96SA4 455 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 NAT9Q9BTE0 207 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 CNPPD1Q9BV87 410 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 CAPS2Q9BXY5 557 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 ALOXE3Q9BYJ1 711 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 ROGDIQ9GZN7 287 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 REXO4Q9GZR2 422 aaKnown RBP7.54□□□□□ -1.2
ACTN1-212ENST00000554158 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.54□□□□□ -1.2
ACTN1-212ENST00000554158 CORO1CQ9ULV4 474 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-212ENST00000554158 PPIEQ9UNP9 301 aaKnown RBP7.54□□□□□ -1.2
ACTN1-212ENST00000554158 SLC22A14Q9Y267 594 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 MED16Q9Y2X0 877 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 FAM215AQ9Y5M1 114 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 DSCAMO60469 2012 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 HEATR5AQ86XA9 2040 aa7.54□□□□□ -1.2
ACTN1-212ENST00000554158 EXPH5Q8NEV8 1989 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 A0A0G2JMM0 328 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 A0A1W2PPB8 328 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 A0A1W2PRS3 328 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 A6NJY4 79 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 KIR3DP1A8MWS1 328 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 CAPN14A8MX76 684 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 AHRRA9YTQ3 701 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 EEF1E1-BLOC1S5C9J1V9 151 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 CASKO14936 926 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 EEF1E1O43324 174 aaKnown RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 PRKNO60260 465 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 CTNSO60931 367 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 WDR47O94967 919 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 GOSR1O95249 250 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 CCDC175P0C221 793 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 C1GALT1C1LP0DN25 315 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 GDF1P27539 372 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 PPP2R1BP30154 601 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 ADH7P40394 386 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 MSH2P43246 934 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 MAGEA6P43360 314 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 EIF1AXP47813 144 aaKnown RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 MTTPP55157 894 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 CDKN2DP55273 166 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 PPP2R2BQ00005 443 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 PCBP2Q15366 365 aaKnown RBP eCLIP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 TOMM20Q15388 145 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 PPP1R7Q15435 360 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 SIX1Q15475 284 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 HIST2H2ACQ16777 129 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 SPANXN3Q5MJ09 141 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 RBM20Q5T481 1227 aaKnown RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 LCE2DQ5TA82 110 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 ANKRD22Q5VYY1 191 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 SHEQ5VZ18 495 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 HIST2H2AA3Q6FI13 130 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 SLC29A4Q7RTT9 530 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 MED12LQ86YW9 2145 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 LACC1Q8IV20 430 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 LIX1LQ8IVB5 337 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 P3H2Q8IVL5 708 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 DND1Q8IYX4 353 aaKnown RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 ANKRD53Q8N9V6 530 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 SRFBP1Q8NEF9 429 aaKnown RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 OR2L5Q8NG80 312 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 OR8K3Q8NH51 312 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 SLC2A12Q8TD20 617 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 GRK7Q8WTQ7 553 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 MAGOHBQ96A72 148 aaKnown RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 DGAT2Q96PD7 388 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 KRT12Q99456 494 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 NAP1L3Q99457 506 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms