RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 OCA2Q04671 838 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 SRSF11Q05519 484 aaKnown RBP9.21□□□□□ -0.94
CHD8-204ENST00000553622 SLC13A2Q13183 592 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 UGT8Q16880 541 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 MINDY4Q4G0A6 757 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 C6orf10Q5SRN2 563 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 MLIPQ5VWP3 458 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 OR4F3Q6IEY1 312 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 OR52E8Q6IFG1 317 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 BLOC1S3Q6QNY0 202 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 SHISA6Q6ZSJ9 500 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 CCDC121Q6ZUS5 278 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 ANKRD46Q86W74 232 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 FUNDC1Q8IVP5 155 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 OR4N5Q8IXE1 308 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 GLB1L3Q8NCI6 653 aaPredicted RBP9.21□□□□□ -0.94
CHD8-204ENST00000553622 ADAMTS18Q8TE60 1221 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 TBC1D20Q96BZ9 403 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 CMTM5Q96DZ9 223 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 NSL1Q96IY1 281 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 GBP5Q96PP8 586 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 BBS4Q96RK4 519 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 ZPBPQ9BS86 351 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 SLC25A23Q9BV35 468 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 DUSP26Q9BV47 211 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 POLR1BQ9H9Y6 1135 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 PRTFDC1Q9NRG1 225 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 ATAD3AQ9NVI7 634 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 FOXJ2Q9P0K8 574 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 CTSFQ9UBX1 484 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 ATP6V1HQ9UI12 483 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 TAGLN3Q9UI15 199 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 PSME2Q9UL46 239 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 EXO1Q9UQ84 846 aaKnown RBP9.21□□□□□ -0.94
CHD8-204ENST00000553622 ENTPD4Q9Y227 616 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 WBP11Q9Y2W2 641 aaKnown RBP9.21□□□□□ -0.94
CHD8-204ENST00000553622 MAP4K5Q9Y4K4 846 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 ZNF780BQ9Y6R6 833 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 OR2W5A6NFC9 320 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 C9orf172C9J069 976 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 CLDN4O14493 209 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 MRASO14807 208 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 AIM2O14862 343 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 NVLO15381 856 aaKnown RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 PDPK1O15530 556 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 LDB3O75112 727 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 JRKO75564 520 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 CPSF4O95639 269 aaKnown RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 IL6P05231 212 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 PGRP06401 933 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 FHP07954 510 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 ABCB1P08183 1280 aaPredicted RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 CCNYL3P0C7X3 344 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 CAPN3P20807 821 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 PRDX6P30041 224 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 NTSP30990 170 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 FEN1P39748 380 aaKnown RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 HNRNPFP52597 415 aaKnown RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 STX5Q13190 355 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 ART3Q13508 389 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 RCAN2Q14206 197 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 KRT72Q14CN4 511 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 PRSS53Q2L4Q9 553 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 DPY19L1Q2PZI1 675 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 ZNF385BQ569K4 471 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 VWA2Q5GFL6 755 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 REP15Q6BDI9 236 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 SLC48A1Q6P1K1 146 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 SLC2A7Q6PXP3 512 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 C6orf15Q6UXA7 325 aaPredicted RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 DNAJC14Q6Y2X3 702 aaPredicted RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 TMPRSS7Q7RTY8 843 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 ZC3H7AQ8IWR0 971 aaKnown RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 RIMKLAQ8IXN7 391 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 TMEM52Q8NDY8 209 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 OR4K14Q8NGD5 310 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 RP9Q8TA86 221 aaKnown RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.2□□□□□ -0.94
CHD8-204ENST00000553622 TESCQ96BS2 214 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 RCN3Q96D15 328 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 MTERF3Q96E29 417 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 NPAS2Q99743 824 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 CHST8Q9H2A9 424 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 SOX17Q9H6I2 414 aaPredicted RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 RMND5AQ9H871 391 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 CLK4Q9HAZ1 481 aaKnown RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 IL1RL2Q9HB29 575 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 MKKSQ9NPJ1 570 aaPredicted RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 SLC35C2Q9NQQ7 365 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 ENAMQ9NRM1 1142 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 ZNF282Q9UDV7 671 aaPredicted RBP9.2□□□□□ -0.94
CHD8-204ENST00000553622 NDUFAF1Q9Y375 327 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 AK5Q9Y6K8 562 aa9.2□□□□□ -0.94
CHD8-204ENST00000553622 SPEGQ15772 3267 aa9.19□□□□□ -0.94
CHD8-204ENST00000553622 AHCTF1Q8WYP5 2266 aa9.19□□□□□ -0.94
CHD8-204ENST00000553622 CYR61O00622 381 aa9.19□□□□□ -0.94
CHD8-204ENST00000553622 FGF17O60258 216 aa9.19□□□□□ -0.94
CHD8-204ENST00000553622 OR10H2O60403 315 aa9.19□□□□□ -0.94
CHD8-204ENST00000553622 ANP32DO95626 131 aa9.19□□□□□ -0.94
CHD8-204ENST00000553622 MAOAP21397 527 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms