RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 IL22Q9GZX6 179 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 DEFB127Q9H1M4 99 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 DMRT3Q9NQL9 472 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 CCDC177Q9NQR7 707 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 NECTIN3Q9NQS3 549 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 EIF2B3Q9NR50 452 aaKnown RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 SYBUQ9NX95 663 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 CBLCQ9ULV8 474 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 CRYL1Q9Y2S2 319 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 CLDN16Q9Y5I7 305 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 RAI1Q7Z5J4 1906 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-219ENST00000553488 TRBV11-1A0A0K0K1C0 115 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 CTAGE15A4D2H0 777 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 FAM166BA8MTA8 275 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 C4orf51C9J302 202 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 BCKDKO14874 412 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 NDUFS4O43181 175 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 CHST10O43529 356 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 B4GALT2O60909 372 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 VAPBO95292 243 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 SYF2O95926 243 aaKnown RBP6.74□□□□□ -1.33
ATXN3-219ENST00000553488 TUBB4AP04350 444 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 HEXAP06865 529 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 CDH1P12830 882 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 ENO3P13929 434 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-219ENST00000553488 ALOX12P18054 663 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 CHRM3P20309 590 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 ENDOUP21128 410 aaKnown RBP6.74□□□□□ -1.33
ATXN3-219ENST00000553488 HOXC12P31275 282 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 STIP1P31948 543 aaKnown RBP6.74□□□□□ -1.33
ATXN3-219ENST00000553488 GPR143P51810 404 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 PCBP3P57721 371 aaKnown RBP6.74□□□□□ -1.33
ATXN3-219ENST00000553488 PPIAP62937 165 aaKnown RBP6.74□□□□□ -1.33
ATXN3-219ENST00000553488 TERF2Q15554 542 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 DEFB113Q30KQ7 82 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 DEFB134Q4QY38 66 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 FLYWCH1Q4VC44 716 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF549Q6P9A3 640 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 CES3Q6UWW8 571 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 MBOAT1Q6ZNC8 495 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 C16orf47Q6ZP98 133 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-219ENST00000553488 TRILQ7L0X0 811 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 PIWIL4Q7Z3Z4 852 aaKnown RBP6.74□□□□□ -1.33
ATXN3-219ENST00000553488 CTAGE6Q86UF2 777 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 SCUBE1Q8IWY4 988 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 CCDC170Q8IYT3 715 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 B3GNT7Q8NFL0 401 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 OR2M7Q8NG81 312 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 OR5M9Q8NGP3 310 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 CD200R1Q8TD46 325 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 CREB3L4Q8TEY5 395 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 KCNJ9Q92806 393 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 SLCO2A1Q92959 643 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 MAP6Q96JE9 813 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 C18orf12Q96KH6 178 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 PTCHD1Q96NR3 888 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 SGPP1Q9BX95 441 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 DEFB126Q9BYW3 111 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 FAM129AQ9BZQ8 928 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 SPNS1Q9H2V7 528 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 GFOD1Q9NXC2 390 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 KCMF1Q9P0J7 381 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 KLHL42Q9P2K6 505 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 ROS1P08922 2347 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 MED12LQ86YW9 2145 aa6.74□□□□□ -1.33
ATXN3-219ENST00000553488 CHD3Q12873 2000 aaKnown RBP6.74□□□□□ -1.33
ATXN3-219ENST00000553488 HEATR5AQ86XA9 2040 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 MIF4GDA9UHW6 222 aaKnown RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 E5RI56 91 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 ACOT7O00154 380 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 AQP7O14520 342 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 CEP104O60308 925 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 PSPNO60542 156 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 WDR1O75083 606 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 OR6B1O95007 311 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF205O95201 554 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 RAF1P04049 648 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 PTMAP06454 111 aaKnown RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 INHBBP09529 407 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 ZSCAN5DPP0CG00 497 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF888P0CJ79 500 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 SMIM10L1P0DMW3 83 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 MGAT1P26572 445 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 PPP2R1BP30154 601 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 RPL22P35268 128 aaKnown RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 CYLC1P35663 651 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 MAGEA5P43359 124 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 KIR2DL2P43627 348 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 KIR2DL3P43628 341 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 SSR4P51571 173 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 CLCN2P51788 898 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 DGKQP52824 942 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 MEF2AQ02078 507 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 FOXO1Q12778 655 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 SPA17Q15506 151 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 TTLL9Q3SXZ7 439 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 FBXL19-AS1Q494R0 122 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 C1orf185Q5T7R7 199 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 RIPPLY2Q5TAB7 128 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF585AQ6P3V2 769 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms