RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 AZIN2Q96A70 460 aa4.39□□□□□ -1.71
SCFD1-209ENST00000553280 NACA2Q9H009 215 aa4.39□□□□□ -1.71
SCFD1-209ENST00000553280 SLC52A3Q9NQ40 469 aa4.39□□□□□ -1.71
SCFD1-209ENST00000553280 ERVK-18Q9QC07 812 aa4.39□□□□□ -1.71
SCFD1-209ENST00000553280 KCNG2Q9UJ96 466 aa4.39□□□□□ -1.71
SCFD1-209ENST00000553280 DIMT1Q9UNQ2 313 aaKnown RBP4.39□□□□□ -1.71
SCFD1-209ENST00000553280 ZMYM6O95789 1325 aa4.39□□□□□ -1.71
SCFD1-209ENST00000553280 PTPRUQ92729 1446 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 A0A087WZY1 265 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 A0A1B0GWJ7 208 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 GLTPD2A6NH11 291 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 BLOC1S5-TXNDC5H3BN57 136 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 ADAM12O43184 909 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 LRCH4O75427 683 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 ZCCHC18P0CG32 403 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 MTTPP55157 894 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 BACE1P56817 501 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 MYBPC1Q00872 1141 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 FUT7Q11130 342 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 AGKQ53H12 422 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 RIPPLY2Q5TAB7 128 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 LIPJQ5W064 366 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 CES4AQ5XG92 561 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 RTL6Q6ICC9 239 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 KIAA1161Q6NSJ0 714 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 ARSKQ6UWY0 536 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 MEX3BQ6ZN04 569 aaKnown RBP4.38□□□□□ -1.71
SCFD1-209ENST00000553280 COLGALT1Q8NBJ5 622 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 GMCL1P1Q8NEA9 526 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 GOLGA5Q8TBA6 731 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 NCLNQ969V3 563 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 TMEM45BQ96B21 275 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 TRIM44Q96DX7 344 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-209ENST00000553280 VPS39Q96JC1 886 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 FAM218AQ96MZ4 157 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 JPH2Q9BR39 696 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-209ENST00000553280 THUMPD2Q9BTF0 503 aaKnown RBP4.38□□□□□ -1.71
SCFD1-209ENST00000553280 FUCA2Q9BTY2 467 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 WWP1Q9H0M0 922 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 ROPN1Q9HAT0 212 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-209ENST00000553280 MGAT4BQ9UQ53 548 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 KIF3AQ9Y496 699 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 LRP12Q9Y561 859 aa4.38□□□□□ -1.71
SCFD1-209ENST00000553280 MYH14Q7Z406 1995 aaKnown RBP4.37□□□□□ -1.71
SCFD1-209ENST00000553280 SHISA7A6NL88 538 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 PMS2P5A8MQ11 134 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 ANGPT2O15123 496 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 SIGLEC5O15389 551 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 LMX1BO60663 402 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 KRT6BP04259 564 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 HSPA5P11021 654 aaKnown RBP4.37□□□□□ -1.71
SCFD1-209ENST00000553280 MYOGP15173 224 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 CEBPBP17676 345 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 C4BPBP20851 252 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 GIFP27352 417 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 HLA-FP30511 346 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 ADSSP30520 456 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 ACADSBP45954 432 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 KRT6CP48668 564 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 FHITP49789 147 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 TRA2BP62995 288 aaKnown RBP4.37□□□□□ -1.71
SCFD1-209ENST00000553280 PHEXP78562 749 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 PMP22Q01453 160 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 FAM53AQ6NSI3 398 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-209ENST00000553280 TRIM65Q6PJ69 517 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 MCM10Q7L590 875 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 PTAR1Q7Z6K3 402 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-209ENST00000553280 SLC22A16Q86VW1 577 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 BCORP1Q8N888 145 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 IPMKQ8NFU5 416 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 MAPK15Q8TD08 544 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 CHPT1Q8WUD6 406 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 SELENOMQ8WWX9 145 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 PHYHIPQ92561 330 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 FCGR1BQ92637 280 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 DTNBP1Q96EV8 351 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 PCED1BQ96HM7 432 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 C3orf14Q9HBI5 128 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 GDF3Q9NR23 364 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 MED17Q9NVC6 651 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 C2orf42Q9NWW7 574 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 ATXN10Q9UBB4 475 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 ERRFI1Q9UJM3 462 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-209ENST00000553280 PLCL2Q9UPR0 1127 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 WDR37Q9Y2I8 494 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 CNTNAP2Q9UHC6 1331 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 ATAD2BQ9ULI0 1458 aa4.37□□□□□ -1.71
SCFD1-209ENST00000553280 GREB1LQ9C091 1923 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-209ENST00000553280 A0A087WW49 117 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 A0A1W2PR80 420 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 SH3PXD2BA1X283 911 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 ANHXE9PGG2 379 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 SLCO1B7G3V0H7 640 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 SURF4O15260 269 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 CHADO15335 359 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 KRT86O43790 486 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 CSDE1O75534 798 aaKnown RBP4.36□□□□□ -1.71
SCFD1-209ENST00000553280 CEACAM4O75871 244 aa4.36□□□□□ -1.71
SCFD1-209ENST00000553280 ANGPTL1O95841 491 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms