RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 TPSAB1Q15661 275 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 ZNF750Q32MQ0 723 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 DEFB134Q4QY38 66 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 MSS51Q4VC12 460 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 THEMIS2Q5TEJ8 643 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 C4orf22Q6V702 233 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 CYHR1Q6ZMK1 362 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 CENPUQ71F23 418 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 ZBED8Q8IZ13 594 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 ASB15Q8WXK1 588 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 PIGTQ969N2 578 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 NCLNQ969V3 563 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 KIAA1191Q96A73 305 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 DACH2Q96NX9 599 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 RASL10BQ96S79 203 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 VIPAS39Q9H9C1 493 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 LIN28AQ9H9Z2 209 aaKnown RBP10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 CHRAC1Q9NRG0 131 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 ABCF3Q9NUQ8 709 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 TUBA8Q9NY65 449 aaPredicted RBP10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 MYOTQ9UBF9 498 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 CHMP2BQ9UQN3 213 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 MED12Q93074 2177 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 MED12LQ86YW9 2145 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 SMIM23A6NLE4 172 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 H3BQF6 201 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 AVILO75366 819 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 MYO1DO94832 1006 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 ESR1P03372 595 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 SLC35G6P0C7Q6 338 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 SMIM10L1P0DMW3 83 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 BMP7P18075 431 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 DNASE1L1P49184 302 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 HYAL2Q12891 473 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 PWP1Q13610 501 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 POU4F3Q15319 338 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 ACSF3Q4G176 576 aaPredicted RBP10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 CEP85LQ5SZL2 805 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 PPP1R21Q6ZMI0 780 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 RTL4Q6ZR62 310 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 SCUBE1Q8IWY4 988 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 GOLM1Q8NBJ4 401 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 OR4K1Q8NGD4 311 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 FAM136AQ96C01 138 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 CFAP36Q96G28 342 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 SMIM10Q96HG1 83 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 SCYL1Q96KG9 808 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 SERPINB12Q96P63 405 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 SLC30A3Q99726 388 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 WDR83Q9BRX9 315 aaKnown RBP10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 YIPF4Q9BSR8 244 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 LDAHQ9H6V9 325 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 KLHL42Q9P2K6 505 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 ATG4BQ9Y4P1 393 aa10.48□□□□□ -0.73
SUPT16H-202ENST00000552829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.48□□□□□ -0.732e-7■■■□□ 15.8
SUPT16H-202ENST00000552829 MBD3L4A6NDZ8 208 aaPredicted RBP10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 MBD3L5A6NJ08 208 aaPredicted RBP10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 AHRRA9YTQ3 701 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 TGFBR3LH3BV60 316 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 CLDN4O14493 209 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 ZNF354AO60765 605 aaPredicted RBP10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 MPC1LP0DKB6 136 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 CCL3P10147 92 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 RNH1P13489 461 aaKnown RBP10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 ELK3P41970 407 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 MAGEA6P43360 314 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 CLCN7P51798 805 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 WNT3P56703 355 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 SKP1P63208 163 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 IFFO1Q0D2I5 559 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 SLC29A2Q14542 456 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 HMBOX1Q6NT76 420 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 NIPAL1Q6NVV3 410 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 ADGRD1Q6QNK2 874 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 LRIG3Q6UXM1 1119 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 TRMT10CQ7L0Y3 403 aaKnown RBP10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 STRA8Q7Z7C7 330 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 CAND1Q86VP6 1230 aaKnown RBP10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 LACC1Q8IV20 430 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 PDIK1LQ8N165 341 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 FBXO36Q8NEA4 188 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 ABHD11Q8NFV4 315 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 GIMAP7Q8NHV1 300 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 PPP1R14CQ8TAE6 165 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 NT5CQ8TCD5 201 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 UTP15Q8TED0 518 aaKnown RBP10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 TMEM158Q8WZ71 300 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 SGCZQ96LD1 299 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 TCF12Q99081 682 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 CCDC77Q9BR77 488 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 PCBD2Q9H0N5 130 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 TSPYL1Q9H0U9 437 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 SH2D2AQ9NP31 389 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 ACKR4Q9NPB9 350 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 CCDC177Q9NQR7 707 aaPredicted RBP10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 SACM1LQ9NTJ5 587 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 MED16Q9Y2X0 877 aa10.47□□□□□ -0.73
SUPT16H-202ENST00000552829 MMACHCQ9Y4U1 282 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms