RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 SMG7Q92540 1137 aaKnown RBP10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 AP3S1Q92572 193 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 SH3KBP1Q96B97 665 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 GPR137Q96N19 417 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 APOL5Q9BWW9 433 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 C11orf54Q9H0W9 315 aaPredicted RBP10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 ABCG8Q9H221 673 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 TRIM45Q9H8W5 580 aaPredicted RBP10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 RBFOX1Q9NWB1 397 aaKnown RBP10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 KCTD5Q9NXV2 234 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 AASSQ9UDR5 926 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 ING4Q9UNL4 249 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 ABCG2Q9UNQ0 655 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 CCL27Q9Y4X3 112 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 HSPB11Q9Y547 144 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 SNX8Q9Y5X2 465 aa10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 PRRC2BQ5JSZ5 2229 aaKnown RBP10.55□□□□□ -0.72
TUBA1C-209ENST00000552448 FABP12A6NFH5 140 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 TUBAL3A6NHL2 446 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ZNF670-ZNF695F2Z2N8 137 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 PTHP01270 115 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 IL1AP01583 271 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 STSP08842 583 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 GDF5P43026 501 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 MAP2K3P46734 347 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 RRAS2P62070 204 aaPredicted RBP10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 POLR2LP62875 67 aaKnown RBP10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 NTHL1P78549 312 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 KCNC3Q14003 757 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ABRAXAS2Q15018 415 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 TATDN3Q17R31 274 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 COL28A1Q2UY09 1125 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 CBLL1Q75N03 491 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 MILR1Q7Z6M3 343 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 SLC44A2Q8IWA5 706 aaPredicted RBP10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 GHDCQ8N2G8 530 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 OR4M1Q8NGD0 313 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ULK4Q96C45 1275 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 MSLNLQ96KJ4 702 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 MRGPRX3Q96LB0 322 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ZSWIM3Q96MP5 696 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 HBEGFQ99075 208 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 EGFL8Q99944 293 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ZSCAN5AQ9BUG6 496 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 PBX4Q9BYU1 374 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 SPNS1Q9H2V7 528 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 IKZF5Q9H5V7 419 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 RANBP3Q9H6Z4 567 aaPredicted RBP10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 FOLH1BQ9HBA9 442 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ZC4H2Q9NQZ6 224 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 MARK1Q9P0L2 795 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ATPIF1Q9UII2 106 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 MBD1Q9UIS9 605 aaPredicted RBP10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ZNF490Q9ULM2 529 aaPredicted RBP10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 PCDHGB7Q9Y5F8 929 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 MYO7AQ13402 2215 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ADAMDEC1O15204 470 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 HSMCR30P0CW71 290 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 GABRB1P18505 474 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 TNNI3P19429 210 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ENPP1P22413 925 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 PER3P56645 1201 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 VEZF1Q14119 521 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 TSTQ16762 297 aaKnown RBP10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 RFTN2Q52LD8 501 aaPredicted RBP10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 DDI2Q5TDH0 399 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 RNLSQ5VYX0 342 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 SAXO2Q658L1 398 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 BRAT1Q6PJG6 821 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ADGRD2Q7Z7M1 963 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 C19orf18Q8NEA5 215 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 OR8H1Q8NGG4 311 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 OR10Z1Q8NGY1 313 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ELMO1Q92556 727 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 COQ8BQ96D53 544 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 BARD1Q99728 777 aaKnown RBP10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 RNF167Q9H6Y7 350 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 NT5DC2Q9H857 520 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 SLC28A3Q9HAS3 691 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 AASDHPPTQ9NRN7 309 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 WWOXQ9NZC7 414 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 ZMAT5Q9UDW3 170 aaKnown RBP10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 WNT6Q9Y6F9 365 aa10.54□□□□□ -0.72
TUBA1C-209ENST00000552448 C2orf16Q68DN1 1984 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 FAM170BA6NMN3 283 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 SNAPC5O75971 98 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 IFNA7P01567 189 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 CSF3P09919 207 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 OR56A5P0C7T3 313 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 PRPS2P11908 318 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 CKMT1AP12532 417 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 CEBPBP17676 345 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 AOAHP28039 575 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 S100A3P33764 101 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 KDELR2P33947 212 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 KIR2DL3P43628 341 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 CLDN20P56880 219 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 BTG1P62324 171 aa10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 POU6F2P78424 691 aaPredicted RBP10.53□□□□□ -0.72
TUBA1C-209ENST00000552448 DAB2P98082 770 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms