RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 PPP3R2Q96LZ3 170 aa7.65□□□□□ -1.18
BEST3-211ENST00000552295 GFM1Q96RP9 751 aaKnown RBP7.65□□□□□ -1.18
BEST3-211ENST00000552295 SERPINI1Q99574 410 aa7.65□□□□□ -1.18
BEST3-211ENST00000552295 DPYSL5Q9BPU6 564 aa7.65□□□□□ -1.18
BEST3-211ENST00000552295 MRPL1Q9BYD6 325 aaKnown RBP7.65□□□□□ -1.18
BEST3-211ENST00000552295 NMUR2Q9GZQ4 415 aa7.65□□□□□ -1.18
BEST3-211ENST00000552295 MYLK2Q9H1R3 596 aa7.65□□□□□ -1.18
BEST3-211ENST00000552295 OR51B5Q9H339 312 aa7.65□□□□□ -1.18
BEST3-211ENST00000552295 ZNF768Q9H5H4 540 aaKnown RBP7.65□□□□□ -1.18
BEST3-211ENST00000552295 C1orf109Q9NX04 203 aa7.65□□□□□ -1.18
BEST3-211ENST00000552295 VPS29Q9UBQ0 182 aa7.65□□□□□ -1.18
BEST3-211ENST00000552295 LAMA1P25391 3075 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 IGHV5-10-1A0A0J9YXX1 117 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 LRIT2A6NDA9 550 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 C4orf51C9J302 202 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 D6RAR5 112 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 H0YGG7 62 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 SAP18O00422 153 aaKnown RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 PLPP1O14494 284 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 FCHO1O14526 889 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 UBDO15205 165 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 TOX3O15405 576 aaPredicted RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 P2RX6O15547 441 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 NDUFS4O43181 175 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 RRP9O43818 475 aaKnown RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 SEC22BO75396 215 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 RASSF9O75901 435 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 DCTN3O75935 186 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 SEMA3DO95025 777 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 ANKRD34CP0C6C1 535 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 THRAP10827 490 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 PTX3P26022 381 aaPredicted RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 HNRNPH1P31943 449 aaKnown RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 ARF3P61204 181 aaPredicted RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 RPL38P63173 70 aaKnown RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 HSD11B2P80365 405 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 NHLH1Q02575 133 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 EMX2Q04743 252 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 DEFB110Q30KQ9 67 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 ADPRMQ3LIE5 342 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 ZC3H12BQ5HYM0 836 aaKnown RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 TOR1AIP1Q5JTV8 583 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 SPDYAQ5MJ70 313 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 ARHGAP22Q7Z5H3 698 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 SPATA19Q7Z5L4 167 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 ASPGQ86U10 573 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 MTDHQ86UE4 582 aaKnown RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 KMT5CQ86Y97 462 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 METTL4Q8N3J2 472 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 D2HGDHQ8N465 521 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 C1orf52Q8N6N3 182 aaKnown RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 FNDC5Q8NAU1 212 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 CHTF18Q8WVB6 975 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 SLC13A3Q8WWT9 602 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 METTL2AQ96IZ6 378 aaKnown RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 FCRL1Q96LA6 429 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 ZNF285Q96NJ3 590 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 CATSPER2Q96P56 530 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 F2RL3Q96RI0 385 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 CDC6Q99741 560 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 MACROD1Q9BQ69 325 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 C1orf50Q9BV19 199 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 ZNF717Q9BY31 904 aaPredicted RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 KLHL31Q9H511 634 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 SYNDIG1Q9H7V2 258 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 PDE7BQ9NP56 450 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 SAR1AQ9NR31 198 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 NMRK1Q9NWW6 199 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 SOHLH2Q9NX45 425 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 ASIC5Q9NY37 505 aa7.64□□□□□ -1.19
BEST3-211ENST00000552295 G3BP2Q9UN86 482 aaKnown RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 COPG1Q9Y678 874 aaKnown RBP7.64□□□□□ -1.19
BEST3-211ENST00000552295 A8MU76 341 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 SRPX2O60687 465 aaPredicted RBP7.63□□□□□ -1.19
BEST3-211ENST00000552295 CCDC22O60826 627 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 SERPIND1P05546 499 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 SLC35G6P0C7Q6 338 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 G6PDP11413 515 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 IDO1P14902 403 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 NELFEP18615 380 aaKnown RBP7.63□□□□□ -1.19
BEST3-211ENST00000552295 SDC1P18827 310 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 NCF2P19878 526 aaPredicted RBP7.63□□□□□ -1.19
BEST3-211ENST00000552295 TIA1P31483 386 aaKnown RBP eCLIP7.63□□□□□ -1.19
BEST3-211ENST00000552295 BSGP35613 385 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 MRPL19P49406 292 aaKnown RBP7.63□□□□□ -1.19
BEST3-211ENST00000552295 SEPHS1P49903 392 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 ATP4BP51164 291 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 PDX1P52945 283 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 LIMK1P53667 647 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 DIO3P55073 304 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 VSX2P58304 361 aaPredicted RBP7.63□□□□□ -1.19
BEST3-211ENST00000552295 RAE1P78406 368 aaKnown RBP7.63□□□□□ -1.19
BEST3-211ENST00000552295 RGS1Q08116 209 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 ACSM2AQ08AH3 577 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 MAD2L1Q13257 205 aaPredicted RBP7.63□□□□□ -1.19
BEST3-211ENST00000552295 SPIDRQ14159 915 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 KCNAB1Q14722 419 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 GSTA3Q16772 222 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 PRTGQ2VWP7 1150 aa7.63□□□□□ -1.19
BEST3-211ENST00000552295 TMEM35AQ53FP2 167 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms