RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 ATP5A1P25705 553 aaKnown RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 GCAP28676 217 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 PPP2R1BP30154 601 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 TSFMP43897 325 aaKnown RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 KRT6CP48668 564 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 CLCN2P51788 898 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 CDH13P55290 713 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 HERVK_113P63132 956 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 SNRPNP63162 240 aaKnown RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 CLCQ05315 142 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 TNP2Q05952 138 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 SLAMF1Q13291 335 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 BIKQ13323 160 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 SERTAD2Q14140 314 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 ADPRMQ3LIE5 342 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 CCDC153Q494R4 210 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 C10orf62Q5T681 223 aaPredicted RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 C6orf163Q5TEZ5 329 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 PRAMEF9Q5VWM5 478 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 B3GNTL1Q67FW5 361 aaPredicted RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 FCRLBQ6BAA4 426 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 FAM180AQ6UWF9 173 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 TREML4Q6UXN2 200 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 Q6ZS92 163 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 PAGE2Q7Z2X7 111 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 VN1R5Q7Z5H4 357 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 CLNKQ7Z7G1 428 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 GPR180Q86V85 440 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 RPS19BP1Q86WX3 136 aaKnown RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 NUDT13Q86X67 352 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 RIBC1Q8N443 379 aaPredicted RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 HORMAD2Q8N7B1 307 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 CCNYL1Q8N7R7 359 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 ACOT4Q8N9L9 421 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 L3MBTL4Q8NA19 623 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 FAM98AQ8NCA5 519 aaKnown RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 CATSPER1Q8NEC5 780 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 MYRIPQ8NFW9 859 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 OR4F6Q8NGB9 312 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 OR52B6Q8NGF0 335 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 TRPC4APQ8TEL6 797 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 SELENOMQ8WWX9 145 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 HAS2Q92819 552 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 DAZLQ92904 295 aaKnown RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 VMP1Q96GC9 406 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 C5orf34Q96MH7 638 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 QRFPRQ96P65 431 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 DGAT2Q96PD7 388 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 MAPKAP1Q9BPZ7 522 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 UTP23Q9BRU9 249 aaKnown RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 NTMT1Q9BV86 223 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 ERVK-6Q9BXR3 956 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 ALOXE3Q9BYJ1 711 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 TXLNGYQ9BZA5 131 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 RPF2Q9H7B2 306 aaKnown RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 ANKZF1Q9H8Y5 726 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 LYRM4Q9HD34 91 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 MMP25Q9NPA2 562 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 BRD7Q9NPI1 651 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 DMRT3Q9NQL9 472 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 NECTIN3Q9NQS3 549 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 PRDM7Q9NQW5 492 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 LYARQ9NX58 379 aaKnown RBP5.53□□□□□ -1.52
CCDC65-204ENST00000552188 MS4A12Q9NXJ0 267 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 COPS7AQ9UBW8 275 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 PCTPQ9UKL6 214 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 SNX6Q9UNH7 406 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 PLAAQ9Y263 795 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 STK38LQ9Y2H1 464 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 ATRXP46100 2492 aa5.53□□□□□ -1.52
CCDC65-204ENST00000552188 TRBV11-1A0A0K0K1C0 115 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 MYOCOSA0A1B0GUC4 107 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 TCRBV16S1A1N1A0A5B0 115 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 OR5H15A6NDH6 313 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 GABRR3A8MPY1 467 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 FOXE1O00358 373 aaPredicted RBP5.52□□□□□ -1.53
CCDC65-204ENST00000552188 PLPP1O14494 284 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 OR10H2O60403 315 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 PRAMEF2O60811 474 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 LDB3O75112 727 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 ZFAND5O76080 213 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 SORBS2O94875 1100 aaKnown RBP5.52□□□□□ -1.53
CCDC65-204ENST00000552188 OR4F21O95013 312 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 RASAL1O95294 804 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 ESRRBO95718 433 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 MLYCDO95822 493 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 WDPCPO95876 746 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 RPS17P08708 135 aaKnown RBP5.52□□□□□ -1.53
CCDC65-204ENST00000552188 FAM58BPP0C7Q3 252 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 VSIG8P0DPA2 414 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 IMPDH1P20839 514 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 DEKP35659 375 aaKnown RBP5.52□□□□□ -1.53
CCDC65-204ENST00000552188 HSD17B3P37058 310 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 CD97P48960 835 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 NEK2P51955 445 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 EFNA3P52797 238 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 ARFIP1P53367 373 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 NAA20P61599 178 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 VSNL1P62760 191 aa5.52□□□□□ -1.53
CCDC65-204ENST00000552188 PCDH1Q08174 1060 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms