RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 RPL21P46778 160 aaKnown RBP14.04□□□□□ -0.16
CACNB3-220ENST00000551716 AGFG1P52594 562 aaKnown RBP14.04□□□□□ -0.16
CACNB3-220ENST00000551716 AP1S2P56377 157 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 WNT3P56703 355 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 RUNX2Q13950 521 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 SERTAD2Q14140 314 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 RBBP5Q15291 538 aaKnown RBP14.04□□□□□ -0.16
CACNB3-220ENST00000551716 TOR1AIP1Q5JTV8 583 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 VASNQ6EMK4 673 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 LMNTD2Q8IXW0 634 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 SYCE1Q8N0S2 351 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 MYO1HQ8N1T3 1032 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 NUBPLQ8TB37 319 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 JSRP1Q96MG2 331 aaPredicted RBP14.04□□□□□ -0.16
CACNB3-220ENST00000551716 ZFP3Q96NJ6 502 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 TRIB1Q96RU8 372 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 WDR83Q9BRX9 315 aaKnown RBP14.04□□□□□ -0.16
CACNB3-220ENST00000551716 SFXN3Q9BWM7 321 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 ALOXE3Q9BYJ1 711 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 RBSNQ9H1K0 784 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 PELI2Q9HAT8 420 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 SYBUQ9NX95 663 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 ARL15Q9NXU5 204 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 GALNT8Q9NY28 637 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 ZNF226Q9NYT6 803 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 TRMT6Q9UJA5 497 aaKnown RBP14.04□□□□□ -0.16
CACNB3-220ENST00000551716 NPFFR2Q9Y5X5 522 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 ARHGAP21Q5T5U3 1957 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 SONP18583 2426 aaKnown RBP14.03□□□□□ -0.16
CACNB3-220ENST00000551716 TGFBR3LH3BV60 316 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 TMIGD3P0DMS9 266 aaPredicted RBP14.03□□□□□ -0.16
CACNB3-220ENST00000551716 SAT1P21673 171 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 GDF1P27539 372 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 SERPINB3P29508 390 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 PCYT1AP49585 367 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 SARNPP82979 210 aaKnown RBP14.03□□□□□ -0.16
CACNB3-220ENST00000551716 DHX9Q08211 1270 aaKnown RBP14.03□□□□□ -0.16
CACNB3-220ENST00000551716 DMTNQ08495 405 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 ASPHQ12797 758 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 RCAN2Q14206 197 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 TBCELQ5QJ74 424 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 ZNF549Q6P9A3 640 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 MBOAT1Q6ZNC8 495 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 ANKRD53Q8N9V6 530 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 TTLQ8NG68 377 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 SLC2A12Q8TD20 617 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 EEF1AKMT1Q8WVE0 214 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 NEIL2Q969S2 332 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 GAL3ST3Q96A11 431 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 PYCR2Q96C36 320 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 SPACA9Q96E40 222 aaPredicted RBP14.03□□□□□ -0.16
CACNB3-220ENST00000551716 OR4K3Q96R72 315 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 ACBD3Q9H3P7 528 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 PIGMQ9H3S5 423 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 CAMK2AQ9UQM7 478 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 DYRK1BQ9Y463 629 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 IKBKGQ9Y6K9 419 aa14.03□□□□□ -0.16
CACNB3-220ENST00000551716 SYCE3A1L190 88 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 ANKRD33BA6NCL7 494 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 LRRC3CA6NJW4 275 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 C17orf105B2RV13 164 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 KDM4EB2RXH2 506 aaPredicted RBP14.02□□□□□ -0.17
CACNB3-220ENST00000551716 CTIFO43310 598 aaKnown RBP14.02□□□□□ -0.17
CACNB3-220ENST00000551716 ZNF354AO60765 605 aaPredicted RBP14.02□□□□□ -0.17
CACNB3-220ENST00000551716 TMCC2O75069 709 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 TRAPPC6AO75865 159 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 PAX1P15863 534 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 DIO3P55073 304 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 BASP1P80723 227 aaKnown RBP14.02□□□□□ -0.17
CACNB3-220ENST00000551716 REEP5Q00765 189 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 NHSL2Q5HYW2 709 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 CASC4Q6P4E1 433 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 ADGRD1Q6QNK2 874 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 SCIMPQ6UWF3 145 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 CLNKQ7Z7G1 428 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 PRUNE1Q86TP1 453 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 ZPLD1Q8TCW7 415 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 CALML6Q8TD86 181 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 SREK1Q8WXA9 508 aaKnown RBP14.02□□□□□ -0.17
CACNB3-220ENST00000551716 TM9SF2Q99805 663 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 DOHHQ9BU89 302 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 UBTD1Q9HAC8 227 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 FBXO6Q9NRD1 293 aaPredicted RBP14.02□□□□□ -0.17
CACNB3-220ENST00000551716 TESMINQ9Y4I5 508 aa14.02□□□□□ -0.17
CACNB3-220ENST00000551716 GRID2IPA4D2P6 1211 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 CYR61O00622 381 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 DYRK3O43781 588 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 H2AFYO75367 372 aaKnown RBP14.01□□□□□ -0.17
CACNB3-220ENST00000551716 HPNP05981 417 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 COX7A2P14406 83 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 GSTM2P28161 218 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 MC3RP41968 323 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 PTH2RP49190 550 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 HNRNPFP52597 415 aaKnown RBP14.01□□□□□ -0.17
CACNB3-220ENST00000551716 GAB1Q13480 694 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 DHX34Q14147 1143 aaKnown RBP14.01□□□□□ -0.17
CACNB3-220ENST00000551716 PRAMEF20Q5VT98 475 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 NXPE4Q6UWF7 544 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 LUZP2Q86TE4 346 aa14.01□□□□□ -0.17
CACNB3-220ENST00000551716 DENND6AQ8IWF6 608 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms