RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 DAPP1Q9UN19 280 aa7.08□□□□□ -1.28
NEK3-201ENST00000550331 ERVK-11Q9UQG0 969 aa7.08□□□□□ -1.28
NEK3-201ENST00000550331 PSAT1Q9Y617 370 aa7.08□□□□□ -1.28
NEK3-201ENST00000550331 AKAP6Q13023 2319 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 A0A0G2JN53 185 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 OR14I1A6ND48 311 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 ANKDD1BA6NHY2 528 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 TMEM200CA6NKL6 621 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 E7ESA3 106 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 TGFBR3LH3BV60 316 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 CYR61O00622 381 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 ZSCAN12O43309 604 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 CTNSO60931 367 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 SEC31AO94979 1220 aaKnown RBP7.07□□□□□ -1.28
NEK3-201ENST00000550331 WISP3O95389 354 aaPredicted RBP7.07□□□□□ -1.28
NEK3-201ENST00000550331 TBX6O95947 436 aaPredicted RBP7.07□□□□□ -1.28
NEK3-201ENST00000550331 PPP2R1BP30154 601 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 GDF5P43026 501 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 HNRNPFP52597 415 aaKnown RBP7.07□□□□□ -1.28
NEK3-201ENST00000550331 MTTPP55157 894 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 LIM2P55344 173 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 TAS2R39P59534 338 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 DR1Q01658 176 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 POU4F1Q01851 419 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 TFF3Q07654 80 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 BMPR2Q13873 1038 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 SERTAD2Q14140 314 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 ZNF460Q14592 562 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 NDUFAF5Q5TEU4 345 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 ABHD17CQ6PCB6 329 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 HSDL2Q6YN16 418 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 CEP128Q6ZU80 1094 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 ACAD11Q709F0 780 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 VN1R5Q7Z5H4 357 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 SLC22A16Q86VW1 577 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 FAM47BQ8NA70 645 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 GOLM1Q8NBJ4 401 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 TMEM52Q8NDY8 209 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 C7orf57Q8NEG2 295 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 OR2M7Q8NG81 312 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 OR52N2Q8NGI0 321 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 OR14A16Q8NHC5 309 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 LILRB4Q8NHJ6 448 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 ANKRD49Q8WVL7 239 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 CCT6BQ92526 530 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 KIAA1191Q96A73 305 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 WDR34Q96EX3 536 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 PTCD3Q96EY7 689 aaKnown RBP7.07□□□□□ -1.28
NEK3-201ENST00000550331 RASL10BQ96S79 203 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 TMEM79Q9BSE2 394 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 EFCAB11Q9BUY7 163 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 ROGDIQ9GZN7 287 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 DERL2Q9GZP9 239 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 COPS7BQ9H9Q2 264 aaPredicted RBP7.07□□□□□ -1.28
NEK3-201ENST00000550331 LYRM4Q9HD34 91 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 KCNJ16Q9NPI9 418 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 DEPPQ9NTK1 212 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 DNAJC11Q9NVH1 559 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 VTI1BQ9UEU0 232 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 HRH3Q9Y5N1 445 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 CLCA3PQ9Y6N3 262 aa7.07□□□□□ -1.28
NEK3-201ENST00000550331 HCFC1P51610 2035 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 PINLYPA6NC86 204 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 NCF1BA6NI72 391 aaPredicted RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 NCF1CA8MVU1 366 aaPredicted RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 BCKDKO14874 412 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 CLGNO14967 610 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 TP73O15350 636 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 PRKNO60260 465 aaPredicted RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 FAM155BO75949 473 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 TOXO94900 526 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 GLSO94925 669 aaPredicted RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 OR6B1O95007 311 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 SCELO95171 688 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 IGHG3P01860 377 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 IFNA16P05015 189 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 NCF1P14598 390 aaPredicted RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 CNR1P21554 472 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 CERS1P27544 350 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 SOX3P41225 446 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 KCNC1P48547 511 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 HK2P52789 917 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 PLA2G16P53816 162 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 SLC12A2P55011 1212 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 ATP6V0D1P61421 351 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 PPIAP62937 165 aaKnown RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 PLGLB1Q02325 96 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 STX4Q12846 297 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 PDIA2Q13087 525 aaKnown RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 LAPTM5Q13571 262 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 FASTKD3Q14CZ7 662 aaKnown RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 HYAL4Q2M3T9 481 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 C18orf21Q32NC0 220 aaPredicted RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 TMEM35AQ53FP2 167 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 XKR6Q5GH73 641 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 EMC4Q5J8M3 183 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 PAGE2BQ5JRK9 111 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 SULT1C3Q6IMI6 304 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 OPN5Q6U736 354 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 IL20RBQ6UXL0 311 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms