RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 FGD3Q5JSP0 725 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 IER5LQ5T953 404 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 UBE2UQ5VVX9 321 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 TBC1D3GQ6DHY5 549 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 TBC1D3CQ6IPX1 549 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 LAIR2Q6ISS4 152 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 C16orf87Q6PH81 154 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 ZNF852Q6ZMS4 543 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 TUBA1AQ71U36 451 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 TBC1D3Q8IZP1 549 aaPredicted RBP8.5□□□□□ -1.05
TMEM116-209ENST00000550020 C2orf73Q8N5S3 287 aaPredicted RBP8.5□□□□□ -1.05
TMEM116-209ENST00000550020 SLC5A8Q8N695 610 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 MFSD9Q8NBP5 474 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 OR2L5Q8NG80 312 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 OR2A1Q8NGT9 310 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 OR5AK3PQ8NH89 298 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 RHOXF1Q8NHV9 184 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 FAM81AQ8TBF8 368 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 TBC1D15Q8TC07 691 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 FKBP10Q96AY3 582 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 EXOSC8Q96B26 276 aaKnown RBP8.5□□□□□ -1.05
TMEM116-209ENST00000550020 SCARF2Q96GP6 870 aaPredicted RBP8.5□□□□□ -1.05
TMEM116-209ENST00000550020 ZNF354BQ96LW1 612 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 ALPK1Q96QP1 1244 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 NOTCH4Q99466 2003 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 BARD1Q99728 777 aaKnown RBP8.5□□□□□ -1.05
TMEM116-209ENST00000550020 KXD1Q9BQD3 176 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 COPS4Q9BT78 406 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 BTBD2Q9BX70 525 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 ZNF717Q9BY31 904 aaPredicted RBP8.5□□□□□ -1.05
TMEM116-209ENST00000550020 ITPAQ9BY32 194 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 RACGAP1Q9H0H5 632 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 SLC28A3Q9HAS3 691 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 C3orf14Q9HBI5 128 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 ACOT13Q9NPJ3 140 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 SLC35C2Q9NQQ7 365 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 PRDM9Q9NQV7 894 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 MBNL1Q9NR56 388 aaKnown RBP8.5□□□□□ -1.05
TMEM116-209ENST00000550020 GPATCH2Q9NW75 528 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 CUEDC1Q9NWM3 386 aaPredicted RBP8.5□□□□□ -1.05
TMEM116-209ENST00000550020 CNOT2Q9NZN8 540 aaKnown RBP8.5□□□□□ -1.05
TMEM116-209ENST00000550020 ANKMY1Q9P2S6 941 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 SEC14L3Q9UDX4 400 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 PSORS1C1Q9UIG5 152 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 MOSPD1Q9UJG1 213 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 KCND3Q9UK17 655 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 ACSL6Q9UKU0 697 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 DUSP12Q9UNI6 340 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 LIPT1Q9Y234 373 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 SH3GLB1Q9Y371 365 aa8.5□□□□□ -1.05
TMEM116-209ENST00000550020 DENND4AQ7Z401 1863 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 A0A0G2JPF8 293 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.49□□□□□ -1.05
TMEM116-209ENST00000550020 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.49□□□□□ -1.05
TMEM116-209ENST00000550020 GSAPA4D1B5 854 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 GRXCR1A8MXD5 290 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 HNRNPCL2B2RXH8 293 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 HNRNPCL3B7ZW38 293 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 CLDN25C9JDP6 229 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 TNFRSF10CO14798 259 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 CASC3O15234 703 aaKnown RBP8.49□□□□□ -1.05
TMEM116-209ENST00000550020 SLC28A2O43868 658 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 PFDN1O60925 122 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 CBFA2T3O75081 653 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 INMTO95050 263 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 MFN2O95140 757 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 APBB3O95704 486 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 H1F0P07305 194 aaKnown RBP8.49□□□□□ -1.05
TMEM116-209ENST00000550020 FHP07954 510 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 HNRNPCL4P0DMR1 293 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 NR2F1P10589 423 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 ACADMP11310 421 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 ZNF182P17025 639 aaPredicted RBP8.49□□□□□ -1.05
TMEM116-209ENST00000550020 CSNK2A2P19784 350 aaPredicted RBP8.49□□□□□ -1.05
TMEM116-209ENST00000550020 MPIP34949 423 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 TIE1P35590 1138 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 WASP42768 502 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 KIR2DL1P43626 348 aaPredicted RBP8.49□□□□□ -1.05
TMEM116-209ENST00000550020 LIMS1P48059 325 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 ENTPD1P49961 510 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 UGT2B15P54855 530 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 GP2P55259 537 aaKnown RBP8.49□□□□□ -1.05
TMEM116-209ENST00000550020 COX10Q12887 443 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 HSPB3Q12988 150 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 LAPTM4AQ15012 233 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 RPE65Q16518 533 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 ADPRMQ3LIE5 342 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 TOR1AIP1Q5JTV8 583 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 DCST1Q5T197 706 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 NDUFAF5Q5TEU4 345 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 ANKRD34AQ69YU3 496 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 GPR153Q6NV75 609 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 CCDC81Q6ZN84 652 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 AHSA2Q719I0 299 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 SPRED2Q7Z698 418 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 ADCK1Q86TW2 530 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 FAM124AQ86V42 546 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 TRIM69Q86WT6 500 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 PLD3Q8IV08 490 aa8.49□□□□□ -1.05
TMEM116-209ENST00000550020 ENTHD1Q8IYW4 607 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms