RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 HSCBQ8IWL3 235 aa2.78□□□□□ -1.96
MRPL42-205ENST00000549561 CLYBLQ8N0X4 340 aa2.78□□□□□ -1.96
MRPL42-205ENST00000549561 PSMA8Q8TAA3 256 aa2.78□□□□□ -1.96
MRPL42-205ENST00000549561 CKAP2Q8WWK9 683 aa2.78□□□□□ -1.96
MRPL42-205ENST00000549561 RCHY1Q96PM5 261 aa2.78□□□□□ -1.96
MRPL42-205ENST00000549561 RASL10BQ96S79 203 aa2.78□□□□□ -1.96
MRPL42-205ENST00000549561 LSG1Q9H089 658 aaKnown RBP2.78□□□□□ -1.96
MRPL42-205ENST00000549561 NMUR1Q9HB89 426 aa2.78□□□□□ -1.96
MRPL42-205ENST00000549561 DNAJC17Q9NVM6 304 aaKnown RBP2.78□□□□□ -1.96
MRPL42-205ENST00000549561 TMEM161AQ9NX61 479 aa2.78□□□□□ -1.96
MRPL42-205ENST00000549561 MIS18AQ9NYP9 233 aa2.78□□□□□ -1.96
MRPL42-205ENST00000549561 NIP7Q9Y221 180 aaKnown RBP eCLIP2.78□□□□□ -1.96
MRPL42-205ENST00000549561 SNX5Q9Y5X3 404 aa2.78□□□□□ -1.96
MRPL42-205ENST00000549561 LOC390937A0A1W2PQ73 354 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 ST8SIA3O43173 380 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 GRAP2O75791 330 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 ACKR3P25106 362 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 FRKP42685 505 aaPredicted RBP2.77□□□□□ -1.97
MRPL42-205ENST00000549561 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 RPS27AP62979 156 aaKnown RBP2.77□□□□□ -1.97
MRPL42-205ENST00000549561 FKBP1BP68106 108 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 TEFQ10587 303 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 CYLC2Q14093 348 aaPredicted RBP2.77□□□□□ -1.97
MRPL42-205ENST00000549561 ECSCRQ19T08 205 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 Q1RN00 199 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 TMEM44Q2T9K0 475 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 VWA2Q5GFL6 755 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 LINC00242Q5T6M2 205 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 PM20D1Q6GTS8 502 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 NUFIP2Q7Z417 695 aaKnown RBP2.77□□□□□ -1.97
MRPL42-205ENST00000549561 ELMOD1Q8N336 334 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 UXS1Q8NBZ7 420 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 RNF149Q8NC42 400 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 ZNRF1Q8ND25 227 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 UBLCP1Q8WVY7 318 aaPredicted RBP2.77□□□□□ -1.97
MRPL42-205ENST00000549561 PCNPQ8WW12 178 aaKnown RBP2.77□□□□□ -1.97
MRPL42-205ENST00000549561 SEPT8Q92599 483 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 ZNF350Q9GZX5 532 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 TNFRSF19Q9NS68 423 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 FBXL5Q9UKA1 691 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 GMEB2Q9UKD1 530 aa2.77□□□□□ -1.97
MRPL42-205ENST00000549561 ZNF346Q9UL40 294 aaKnown RBP2.77□□□□□ -1.97
MRPL42-205ENST00000549561 MRPL11Q9Y3B7 192 aaKnown RBP2.77□□□□□ -1.97
MRPL42-205ENST00000549561 C13orf42A0A1B0GVH6 325 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 ZNF724A8MTY0 619 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 E9PAM4 449 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 CTDSPLO15194 276 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 RTN2O75298 545 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 RAD51DO75771 328 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 GH1P01241 217 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 DUX4L4P0CJ87 422 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 C8orf89P0DMQ9 161 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 HLA-DPA1P20036 260 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 CCND3P30281 292 aaPredicted RBP2.76□□□□□ -1.97
MRPL42-205ENST00000549561 KCNJ1P48048 391 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 SLC1A6P48664 564 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 FHITP49789 147 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 PCK2Q16822 640 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 PRR30Q53SZ7 412 aaPredicted RBP2.76□□□□□ -1.97
MRPL42-205ENST00000549561 NHLRC3Q5JS37 347 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 CACUL1Q86Y37 369 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 HIPK1Q86Z02 1210 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 CARNMT1Q8N4J0 409 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 SMYD1Q8NB12 490 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 CLEC1AQ8NC01 280 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 KLHL30-AS1Q8NEE0 82 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 RHOXF1Q8NHV9 184 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 SNRNP40Q96DI7 357 aaKnown RBP2.76□□□□□ -1.97
MRPL42-205ENST00000549561 RUNDC3BQ96NL0 473 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 C17orf62Q9BQA9 187 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 SLC39A8Q9C0K1 460 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 MTIF3Q9H2K0 278 aaKnown RBP2.76□□□□□ -1.97
MRPL42-205ENST00000549561 SRD5A3Q9H8P0 318 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 DBNDD1Q9H9R9 158 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 S100A14Q9HCY8 104 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 CWC25Q9NXE8 425 aaPredicted RBP2.76□□□□□ -1.97
MRPL42-205ENST00000549561 CNIH4Q9P003 139 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 ITM2BQ9Y287 266 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 TMED7Q9Y3B3 224 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 KNSTRNQ9Y448 316 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 KIF25-AS1Q9Y6Z4 181 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 POGZQ7Z3K3 1410 aa2.76□□□□□ -1.97
MRPL42-205ENST00000549561 ABCA7Q8IZY2 2146 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 ACEP12821 1306 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 UMODL1Q5DID0 1318 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 A0A1W2PRV1 198 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 CCDC162PA2VCL2 907 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 OR5H15A6NDH6 313 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 DDX39AO00148 427 aaKnown RBP2.75□□□□□ -1.97
MRPL42-205ENST00000549561 E2F3O00716 465 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 CRCPO75575 148 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 SLC16A8O95907 504 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 PNPP00491 289 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 THY1P04216 161 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 ANPEPP15144 967 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 SPRP35270 261 aaPredicted RBP2.75□□□□□ -1.97
MRPL42-205ENST00000549561 ATP6V1E1P36543 226 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 CASP3P42574 277 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 ARF5P84085 180 aa2.75□□□□□ -1.97
MRPL42-205ENST00000549561 MFGE8Q08431 387 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms