RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 FBXL6Q8N531 539 aa9.47□□□□□ -0.89
RAB5B-206ENST00000549505 OR13F1Q8NGS4 319 aa9.47□□□□□ -0.89
RAB5B-206ENST00000549505 SUN3Q8TAQ9 357 aa9.47□□□□□ -0.89
RAB5B-206ENST00000549505 NR4A3Q92570 626 aa9.47□□□□□ -0.89
RAB5B-206ENST00000549505 SLC6A17Q9H1V8 727 aa9.47□□□□□ -0.89
RAB5B-206ENST00000549505 SMURF2Q9HAU4 748 aa9.47□□□□□ -0.89
RAB5B-206ENST00000549505 MIEF1Q9NQG6 463 aa9.47□□□□□ -0.89
RAB5B-206ENST00000549505 GIN1Q9NXP7 522 aa9.47□□□□□ -0.89
RAB5B-206ENST00000549505 CACNA1IQ9P0X4 2223 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 PGM3O95394 542 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 MT-ND1P03886 318 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 RHCEP18577 417 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 XAF1Q6GPH4 301 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 CD300LDQ6UXZ3 194 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 RBM44Q6ZP01 1051 aaKnown RBP9.46□□□□□ -0.89
RAB5B-206ENST00000549505 MED25Q71SY5 747 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 ERI1Q8IV48 349 aaKnown RBP9.46□□□□□ -0.89
RAB5B-206ENST00000549505 SAMD14Q8IZD0 417 aaPredicted RBP9.46□□□□□ -0.89
RAB5B-206ENST00000549505 CYGBQ8WWM9 190 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 LZICQ8WZA0 190 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 OR2A5Q96R48 311 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 DPH7Q9BTV6 452 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 PHF7Q9BWX1 381 aaPredicted RBP9.46□□□□□ -0.89
RAB5B-206ENST00000549505 IL21RQ9HBE5 538 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 LYRM4Q9HD34 91 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 SLC35C2Q9NQQ7 365 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 SPHK1Q9NYA1 384 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 GPSM3Q9Y4H4 160 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 PCDHGA8Q9Y5G5 932 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 MAGED1Q9Y5V3 778 aaPredicted RBP9.46□□□□□ -0.89
RAB5B-206ENST00000549505 ENPP4Q9Y6X5 453 aa9.46□□□□□ -0.89
RAB5B-206ENST00000549505 FEZF1A0PJY2 475 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 HMGN4O00479 90 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 EML2O95834 649 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 CHRNB1P11230 501 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 ACADMP11310 421 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 ANXA8P13928 327 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 ETS2P15036 469 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 ITIH1P19827 911 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 PCMT1P22061 227 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 ACSL1P33121 698 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 SLC19A1P41440 591 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 CLK3P49761 638 aaKnown RBP9.46□□□□□ -0.9
RAB5B-206ENST00000549505 TGM3Q08188 693 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 SPIDRQ14159 915 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 SLC9A5Q14940 896 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 CTU2Q2VPK5 515 aaKnown RBP9.46□□□□□ -0.9
RAB5B-206ENST00000549505 IER5LQ5T953 404 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 IQCHQ86VS3 1027 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 RNF130Q86XS8 419 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 ST13P5Q8NFI4 369 aaPredicted RBP9.46□□□□□ -0.9
RAB5B-206ENST00000549505 RPLP0P6Q8NHW5 317 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 FAM81AQ8TBF8 368 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 FAM3CQ92520 227 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 FKBP10Q96AY3 582 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 PIP5K1AQ99755 562 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 SORBS1Q9BX66 1292 aaKnown RBP9.46□□□□□ -0.9
RAB5B-206ENST00000549505 SERHL2Q9H4I8 314 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 CAAP1Q9H8G2 361 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 SYNPO2LQ9H987 977 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 KCMF1Q9P0J7 381 aa9.46□□□□□ -0.9
RAB5B-206ENST00000549505 SAP18O00422 153 aaKnown RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 OXSR1O95747 527 aaPredicted RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 SEMA4FO95754 770 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 EFNA1P20827 205 aaPredicted RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 IGFBP5P24593 272 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 FZD5Q13467 585 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 MICAQ29983 383 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 CWF19L1Q69YN2 538 aaKnown RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 FBXO42Q6P3S6 717 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 SPESP1Q6UW49 350 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 FAM92BQ6ZTR7 304 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 VTCN1Q7Z7D3 282 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 C17orf82Q86X59 251 aaPredicted RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 GJD3Q8N144 294 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 ACOT4Q8N9L9 421 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 AVL9Q8NBF6 648 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 KLHL6Q8WZ60 621 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 PMM1Q92871 262 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 MAGED4Q96JG8 741 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 NRTNQ99748 197 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 GLIPR2Q9H4G4 154 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 REEP1Q9H902 201 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 IMP3Q9NV31 184 aaKnown RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 TEX10Q9NXF1 929 aaPredicted RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 WSB2Q9NYS7 404 aaPredicted RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 APOBEC3BQ9UH17 382 aaKnown RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 RSL24D1Q9UHA3 163 aaKnown RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 CFAP20Q9Y6A4 193 aaKnown RBP9.45□□□□□ -0.9
RAB5B-206ENST00000549505 SPTY2D1-AS1A0A0U1RR47 76 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 A0A1W2PR48 441 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 BTN3A3O00478 584 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 HTR1AP08908 422 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 CBLP22681 906 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 KCNJ5P48544 419 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 IST1P53990 364 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 TMBIM6P55061 237 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 CD47Q08722 323 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 CDK5R2Q13319 367 aa9.45□□□□□ -0.9
RAB5B-206ENST00000549505 NDUFAF5Q5TEU4 345 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms