RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 DENRO43583 198 aaKnown RBP12.73□□□□□ -0.37
PTCH1-215ENST00000547672 CTSVO60911 334 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 PRKD3O94806 890 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 AGR2O95994 175 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 IFI6P09912 130 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 GLB1P16278 677 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 PPP2R1BP30154 601 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 CTSKP43235 329 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 FNTBP49356 437 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 DHPSP49366 369 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-215ENST00000547672 MAZP56270 477 aaKnown RBP12.73□□□□□ -0.37
PTCH1-215ENST00000547672 DSTNP60981 165 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 BIKQ13323 160 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 C6orf132Q5T0Z8 1188 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 SAXO2Q658L1 398 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 ZNF793Q6ZN11 406 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 CBLL1Q75N03 491 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 CCDC80Q76M96 950 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 C6orf120Q7Z4R8 191 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 AMIGO2Q86SJ2 522 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 MCATQ8IVS2 390 aaKnown RBP12.73□□□□□ -0.37
PTCH1-215ENST00000547672 ARL10Q8N8L6 244 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 KCT2Q8NC54 265 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 OR4K14Q8NGD5 310 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 FBXO30Q8TB52 745 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 NETO1Q8TDF5 533 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 N4BP2L2Q92802 583 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-215ENST00000547672 TBC1D20Q96BZ9 403 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 AMDHD1Q96NU7 426 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 ELF4Q99607 663 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-215ENST00000547672 SPATA5L1Q9BVQ7 753 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 ANKHQ9HCJ1 492 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 PDE7BQ9NP56 450 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 GMPR2Q9P2T1 348 aaKnown RBP12.73□□□□□ -0.37
PTCH1-215ENST00000547672 FBXO4Q9UKT5 387 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 FBXW2Q9UKT8 454 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 A0A1B0GVT2 93 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 DLL1O00548 723 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 DPM1O60762 260 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 TNFRSF21O75509 655 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 EIF2S1P05198 315 aaKnown RBP12.72□□□□□ -0.37
PTCH1-215ENST00000547672 FHP07954 510 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 PNLIPP16233 465 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 ITGA2P17301 1181 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 SOX11P35716 441 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 ARL4DP49703 201 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 NCBP2P52298 156 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTCH1-215ENST00000547672 CDK6Q00534 326 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 TNFRSF17Q02223 184 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 FOLH1Q04609 750 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 EPS8Q12929 822 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 SCARB2Q14108 478 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 ADRM1Q16186 407 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 MPEG1Q2M385 716 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 DEFB133Q30KQ1 61 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTCH1-215ENST00000547672 PMS2CLQ68D20 193 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 REEP3Q6NUK4 255 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 TMEM214Q6NUQ4 689 aaKnown RBP12.72□□□□□ -0.37
PTCH1-215ENST00000547672 KMT5CQ86Y97 462 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 PTOV1Q86YD1 416 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 ZDHHC13Q8IUH4 622 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 C1orf210Q8IVY1 113 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 ZNF607Q96SK3 696 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 CHST8Q9H2A9 424 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 SEMA6AQ9H2E6 1030 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 EPS8L2Q9H6S3 715 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 TRIM45Q9H8W5 580 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-215ENST00000547672 A4GALTQ9NPC4 353 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 EVA1BQ9NVM1 165 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 TEX10Q9NXF1 929 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-215ENST00000547672 LRIT1Q9P2V4 623 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 DAPP1Q9UN19 280 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 USP22Q9UPT9 525 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 MRPS33Q9Y291 106 aaKnown RBP12.72□□□□□ -0.37
PTCH1-215ENST00000547672 ATG4BQ9Y4P1 393 aa12.72□□□□□ -0.37
PTCH1-215ENST00000547672 A0A0G2JN53 185 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 MAGEA13PA6NCF6 341 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 DUXAA6NLW8 204 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 EMC8O43402 210 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 DUX1O43812 170 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 ERAL1O75616 437 aaKnown RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 SERPINB7O75635 380 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 PRSS23O95084 383 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 RASAL1O95294 804 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 ZBTB11O95625 1053 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 ZNF682O95780 498 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 AIFM1O95831 613 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 CST1P01037 141 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 RPSAP08865 295 aaKnown RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 ARAFP10398 606 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 EFNA1P20827 205 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 CERS1P27544 350 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 KHKP50053 298 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 VSX2P58304 361 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 SELENOWP63302 87 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 MRPS35P82673 323 aaKnown RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 CSTF1Q05048 431 aaKnown RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 HSPB3Q12988 150 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms