RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 QPCTLQ9NXS2 382 aa8.44□□□□□ -1.06
AC055716.3-201ENST00000547533 NSMCE4AQ9NXX6 385 aa8.44□□□□□ -1.06
AC055716.3-201ENST00000547533 CNIH4Q9P003 139 aa8.44□□□□□ -1.06
AC055716.3-201ENST00000547533 CTNNAL1Q9UBT7 734 aa8.44□□□□□ -1.06
AC055716.3-201ENST00000547533 ASIC3Q9UHC3 531 aa8.44□□□□□ -1.06
AC055716.3-201ENST00000547533 ZNF223Q9UK11 482 aaPredicted RBP8.44□□□□□ -1.06
AC055716.3-201ENST00000547533 DAPP1Q9UN19 280 aa8.44□□□□□ -1.06
AC055716.3-201ENST00000547533 PLEKHA6Q9Y2H5 1048 aa8.44□□□□□ -1.06
AC055716.3-201ENST00000547533 OARD1Q9Y530 152 aa8.44□□□□□ -1.06
AC055716.3-201ENST00000547533 FAM215AQ9Y5M1 114 aa8.44□□□□□ -1.06
AC055716.3-201ENST00000547533 NINQ8N4C6 2090 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 C15orf38-AP3S2A0A0A6YYH1 394 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 TUBAL3A6NHL2 446 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 AHRRA9YTQ3 701 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 TP53I11O14683 189 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 HOXB4P17483 251 aaPredicted RBP8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 BMP5P22003 454 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 SERPINB3P29508 390 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 HNRNPH1P31943 449 aaKnown RBP8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 MSH2P43246 934 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 FNTAP49354 379 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 RPP38P78345 283 aaKnown RBP8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 PLIN5Q00G26 463 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 FOXD4Q12950 439 aaPredicted RBP8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 RUNX2Q13950 521 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 AP5B1Q2VPB7 878 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 TBCELQ5QJ74 424 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 TTC27Q6P3X3 843 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 PAMR1Q6UXH9 720 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 SLC29A4Q7RTT9 530 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 CDC20BQ86Y33 519 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 LACC1Q8IV20 430 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 MMP21Q8N119 569 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 SNX31Q8N9S9 440 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 FAM13CQ8NE31 585 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 NUBPLQ8TB37 319 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 SLC2A12Q8TD20 617 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 MBD6Q96DN6 1003 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 PTCD3Q96EY7 689 aaKnown RBP8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 CFAP36Q96G28 342 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 RBM18Q96H35 190 aaKnown RBP8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 JSRP1Q96MG2 331 aaPredicted RBP8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 YIPF4Q9BSR8 244 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 EFCAB11Q9BUY7 163 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 RBSNQ9H1K0 784 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 EHD1Q9H4M9 534 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 NEUROD4Q9HD90 331 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 ZFP64Q9NPA5 681 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 MS4A12Q9NXJ0 267 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 TUBA8Q9NY65 449 aaPredicted RBP8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 WWOXQ9NZC7 414 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 CRIM1Q9NZV1 1036 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 ZNF629Q9UEG4 869 aaPredicted RBP8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 JRKLQ9Y4A0 524 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 ATG4BQ9Y4P1 393 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 ACANP16112 2415 aa8.43□□□□□ -1.06
AC055716.3-201ENST00000547533 FREM3P0C091 2139 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 IQANK1A0A1B0GTG1 560 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 NPEPPSL1A6NEC2 478 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 ARHGEF9O43307 516 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 PROM1O43490 865 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 PRKNO60260 465 aaPredicted RBP8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 ZNF37AP17032 561 aaPredicted RBP8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 CPN2P22792 545 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 GDF1P27539 372 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 CERS1P27544 350 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 SERPINB1P30740 379 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 TMED10P49755 219 aaKnown RBP8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 TIAL1Q01085 375 aaKnown RBP eCLIP8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 ASPHQ12797 758 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 CYP1B1Q16678 543 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 TMEM35AQ53FP2 167 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 PIGGQ5H8A4 983 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 TEDDM1Q5T9Z0 273 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 TMEM198Q66K66 360 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 C16orf47Q6ZP98 133 aaPredicted RBP8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 SLCO4C1Q6ZQN7 724 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 CHSY3Q70JA7 882 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 TAGAPQ8N103 731 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 NEIL3Q8TAT5 605 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 PTPMT1Q8WUK0 201 aaPredicted RBP8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 LRRC39Q96DD0 335 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 SPACA9Q96E40 222 aaPredicted RBP8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 DTNBP1Q96EV8 351 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 TSPAN17Q96FV3 270 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 ZNF597Q96LX8 424 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 PELOQ9BRX2 385 aaKnown RBP8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 TBCDQ9BTW9 1192 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 DOHHQ9BU89 302 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 PHACTR1Q9C0D0 580 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 ACKR4Q9NPB9 350 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 DMRT3Q9NQL9 472 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 DNAJC11Q9NVH1 559 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 ZNF358Q9NW07 568 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 TXNDC16Q9P2K2 825 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 LIPGQ9Y5X9 500 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 MPDZO75970 2070 aa8.42□□□□□ -1.06
AC055716.3-201ENST00000547533 A0A0G2JMM0 328 aa8.41□□□□□ -1.06
AC055716.3-201ENST00000547533 FAM95CA0A1B0GW59 222 aa8.41□□□□□ -1.06
AC055716.3-201ENST00000547533 A0A1W2PPB8 328 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms