RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CXCR2P25025 360 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 TGFBR1P36897 503 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 ENTPD1P49961 510 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 KCNJ10P78508 379 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 SIM1P81133 766 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-209ENST00000547018 LSM11P83369 360 aaKnown RBP eCLIP12.09□□□□□ -0.47
SCAF11-209ENST00000547018 PRDX1Q06830 199 aaKnown RBP12.09□□□□□ -0.47
SCAF11-209ENST00000547018 LTB4RQ15722 352 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 NPTX1Q15818 432 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 ZBED5Q49AG3 693 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 KCTD21Q4G0X4 260 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 PRRT3Q5FWE3 981 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 KIAA1614Q5VZ46 1190 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 LCTLQ6UWM7 567 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 PAGE2Q7Z2X7 111 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 SYNPOQ8N3V7 929 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 TP53I13Q8NBR0 393 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-209ENST00000547018 SIMC1Q8NDZ2 872 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 SLC38A5Q8WUX1 472 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 OTULINQ96BN8 352 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 COQ8BQ96D53 544 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 C11orf24Q96F05 449 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-209ENST00000547018 TM9SF3Q9HD45 589 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 DZANK1Q9NVP4 752 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 PAK1IP1Q9NWT1 392 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-209ENST00000547018 IMPAD1Q9NX62 359 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 NDUFAF4Q9P032 175 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 SEC14L3Q9UDX4 400 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 CLCA2Q9UQC9 943 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 A0A1W2PQF6 199 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 PRSS38A1L453 326 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 C4orf51C9J302 202 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 ANHXE9PGG2 379 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 OR10H3O60404 316 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 DNAJB6O75190 326 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 APOL3O95236 402 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 CELA2BP08218 269 aaPredicted RBP12.08□□□□□ -0.47
SCAF11-209ENST00000547018 FPR1P21462 350 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 C21orf33P30042 268 aaPredicted RBP12.08□□□□□ -0.47
SCAF11-209ENST00000547018 CDK5R2Q13319 367 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 PIN1Q13526 163 aaPredicted RBP12.08□□□□□ -0.47
SCAF11-209ENST00000547018 FXNQ16595 210 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 C11orf91Q3C1V1 193 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 IFI44LQ53G44 452 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 LAIR1Q6GTX8 287 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 CHCHD4Q8N4Q1 142 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 ZNF614Q8N883 585 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 GIPC3Q8TF64 312 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 MRGPRX1Q96LB2 322 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 BHLHE41Q9C0J9 482 aaPredicted RBP12.08□□□□□ -0.47
SCAF11-209ENST00000547018 MIR1-1HGQ9H1L0 117 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 EHD1Q9H4M9 534 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 C6orf106Q9H6K1 298 aaPredicted RBP12.08□□□□□ -0.47
SCAF11-209ENST00000547018 PTTG2Q9NZH5 202 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 BTNL2Q9UIR0 455 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 ICKQ9UPZ9 632 aa12.08□□□□□ -0.47
SCAF11-209ENST00000547018 MAP1BP46821 2468 aaKnown RBP12.08□□□□□ -0.48
SCAF11-209ENST00000547018 ALPK3Q96L96 1907 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 PNMA8CA0A1B0GUJ8 204 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 OR2W5A6NFC9 320 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 ZSCAN9O15535 394 aaPredicted RBP12.08□□□□□ -0.48
SCAF11-209ENST00000547018 IL1RNP18510 177 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 NDUFV2P19404 249 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 TNNI3P19429 210 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 BSGP35613 385 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 SELENOWP63302 87 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF438Q7Z4V0 828 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 SPARTQ8N0X7 666 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 SLC9A6Q92581 669 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 BTBD1Q9H0C5 482 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF556Q9HAH1 456 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 C2orf42Q9NWW7 574 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 TAS2R16Q9NYV7 291 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 CD207Q9UJ71 328 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 ACSL5Q9ULC5 683 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 PRAMEF25A6NGN4 478 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 H3BMQ9 156 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 FOXE1O00358 373 aaPredicted RBP12.08□□□□□ -0.48
SCAF11-209ENST00000547018 CDC123O75794 336 aaPredicted RBP12.08□□□□□ -0.48
SCAF11-209ENST00000547018 ALDH3B2P48448 385 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 HLCSP50747 726 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 ISL1P61371 349 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 MVKQ03426 396 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 GRSF1Q12849 480 aaKnown RBP eCLIP12.08□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF658BQ4V348 819 aaPredicted RBP12.08□□□□□ -0.48
SCAF11-209ENST00000547018 OR4C11Q6IEV9 310 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 SHQ1Q6PI26 577 aaKnown RBP12.08□□□□□ -0.48
SCAF11-209ENST00000547018 MTSS1LQ765P7 747 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 BCDIN3DQ7Z5W3 292 aaKnown RBP12.08□□□□□ -0.48
SCAF11-209ENST00000547018 OR52N2Q8NGI0 321 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 SETD7Q8WTS6 366 aaKnown RBP12.08□□□□□ -0.48
SCAF11-209ENST00000547018 SNRNP27Q8WVK2 155 aaKnown RBP12.08□□□□□ -0.48
SCAF11-209ENST00000547018 NRBF2Q96F24 287 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 COG8Q96MW5 612 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 TEX101Q9BY14 249 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 TMEM45AQ9NWC5 275 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 SLCO1B1Q9Y6L6 691 aa12.08□□□□□ -0.48
SCAF11-209ENST00000547018 OR6C74A6NCV1 312 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 GADD45GO95257 159 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 KRT75O95678 551 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms