RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 FBXO5Q9UKT4 447 aa11.74□□□□□ -0.53
SCAF11-208ENST00000546534 CAPN6Q9Y6Q1 641 aa11.74□□□□□ -0.53
SCAF11-208ENST00000546534 MPDZO75970 2070 aa11.74□□□□□ -0.53
SCAF11-208ENST00000546534 STAB1Q9NY15 2570 aa11.74□□□□□ -0.53
SCAF11-208ENST00000546534 SMAD7O15105 426 aaKnown RBP11.73□□□□□ -0.53
SCAF11-208ENST00000546534 GOSR1O95249 250 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 SAT1P21673 171 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 TIMP3P35625 211 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 AGFG1P52594 562 aaKnown RBP11.73□□□□□ -0.53
SCAF11-208ENST00000546534 ZNF136P52737 540 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 ARMC3Q5W041 872 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 DRICH1Q6PGQ1 229 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-208ENST00000546534 EML6Q6ZMW3 1958 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 P3H2Q8IVL5 708 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 ZNF595Q8IYB9 648 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 LRRC25Q8N386 305 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-208ENST00000546534 OR8K3Q8NH51 312 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 DAZLQ92904 295 aaKnown RBP11.73□□□□□ -0.53
SCAF11-208ENST00000546534 GAL3ST3Q96A11 431 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 LINGO1Q96FE5 620 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 FAR2Q96K12 515 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 AIF1LQ9BQI0 150 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 NPLQ9BXD5 320 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-208ENST00000546534 EPB41L4BQ9H329 900 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 ZFP64Q9NPA5 681 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 ACKR4Q9NPB9 350 aa11.73□□□□□ -0.53
SCAF11-208ENST00000546534 C20orf96Q9NUD7 363 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-208ENST00000546534 ARHGAP21Q5T5U3 1957 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 MAGEB16A2A368 324 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 LRRC3CA6NJW4 275 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 AHRRA9YTQ3 701 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 CYR61O00622 381 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 GUCA1CO95843 209 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 IL2RAP01589 272 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 HNRNPH1P31943 449 aaKnown RBP11.72□□□□□ -0.53
SCAF11-208ENST00000546534 KCNJ1P48048 391 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 AP1S2P56377 157 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 STXBP1P61764 594 aaKnown RBP11.72□□□□□ -0.53
SCAF11-208ENST00000546534 KCNJ2P63252 427 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 SARNPP82979 210 aaKnown RBP11.72□□□□□ -0.53
SCAF11-208ENST00000546534 PPP2R2BQ00005 443 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 SORDQ00796 357 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 ASPHQ12797 758 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 KIF5AQ12840 1032 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 ZNF791Q3KP31 576 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-208ENST00000546534 PIGGQ5H8A4 983 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 PRAMEF20Q5VT98 475 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 ANKRD22Q5VYY1 191 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 SLC22A10Q63ZE4 541 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 NXPE4Q6UWF7 544 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 TMPRSS11BQ86T26 416 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 LACC1Q8IV20 430 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 LMNTD2Q8IXW0 634 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 LIX1Q8N485 282 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 SIMC1Q8NDZ2 872 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 OR5L2Q8NGL0 311 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 SLC2A12Q8TD20 617 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 CALML6Q8TD86 181 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 ATL1Q8WXF7 558 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 MS4A6EQ96DS6 147 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 Q96MF0 132 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 QRFPRQ96P65 431 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 ALOXE3Q9BYJ1 711 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 TRIM5Q9C035 493 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 SH2D2AQ9NP31 389 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 TAS2R13Q9NYV9 303 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 VTI1BQ9UEU0 232 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 MRPS33Q9Y291 106 aaKnown RBP11.72□□□□□ -0.53
SCAF11-208ENST00000546534 HIVEP2P31629 2446 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 ATRQ13535 2644 aa11.72□□□□□ -0.53
SCAF11-208ENST00000546534 TLN2Q9Y4G6 2542 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 FBN1P35555 2871 aaKnown RBP11.71□□□□□ -0.53
SCAF11-208ENST00000546534 C15orf38-AP3S2A0A0A6YYH1 394 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 SYNDIG1LA6NDD5 238 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 PABPN1LA6NDY0 278 aaKnown RBP11.71□□□□□ -0.53
SCAF11-208ENST00000546534 SDR42E2A6NKP2 422 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 EEF1E1-BLOC1S5C9J1V9 151 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 EEF1E1O43324 174 aaKnown RBP11.71□□□□□ -0.53
SCAF11-208ENST00000546534 ERI3O43414 337 aaKnown RBP11.71□□□□□ -0.53
SCAF11-208ENST00000546534 B3GALT2O43825 422 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 CTNSO60931 367 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 TNNI3P19429 210 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 MAGEA6P43360 314 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 CDKN2DP55273 166 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 TRIP13Q15645 432 aaPredicted RBP11.71□□□□□ -0.53
SCAF11-208ENST00000546534 HSP90AA5PQ58FG0 334 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 RBM20Q5T481 1227 aaKnown RBP11.71□□□□□ -0.53
SCAF11-208ENST00000546534 THOC6Q86W42 341 aaKnown RBP11.71□□□□□ -0.53
SCAF11-208ENST00000546534 KLHDC8AQ8IYD2 350 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 LRRC75A-AS1Q8N1F1 130 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 OR14A16Q8NHC5 309 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 PAQR8Q8TEZ7 354 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 CSF3RQ99062 836 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 TIMP4Q99727 224 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 WDR83Q9BRX9 315 aaKnown RBP11.71□□□□□ -0.53
SCAF11-208ENST00000546534 BDH2Q9BUT1 245 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 TRIM54Q9BYV2 358 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 PROK2Q9HC23 129 aa11.71□□□□□ -0.53
SCAF11-208ENST00000546534 QPCTLQ9NXS2 382 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms