RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 IDUAP35475 653 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 TBPL1P62380 186 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 ASPHQ12797 758 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 SF3B4Q15427 424 aaKnown RBP eCLIP14.04□□□□□ -0.163e-6■■■■□ 20.8
CLSTN3-216ENST00000545663 AARS2Q5JTZ9 985 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 SEL1L2Q5TEA6 688 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 CLNKQ7Z7G1 428 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 PAQR8Q8TEZ7 354 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 PTPMT1Q8WUK0 201 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 ALKBH8Q96BT7 664 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 OR8D2Q9GZM6 311 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 CCDC177Q9NQR7 707 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 MMACHCQ9Y4U1 282 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 MED12Q93074 2177 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 KIF2AO00139 706 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 RCBTB2O95199 551 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 C1QAP02745 245 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 CHRM3P20309 590 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 PWP1Q13610 501 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 ANKRD34AQ69YU3 496 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 ZNF704Q6ZNC4 412 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 LRRC6Q86X45 466 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 FAM71DQ8N9W8 422 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 OR10G3Q8NGC4 313 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 MAIP1Q8WWC4 291 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 ASB11Q8WXH4 323 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 FAM111AQ96PZ2 611 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 NAP1L3Q99457 506 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 TUBA1CQ9BQE3 449 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 FAM129AQ9BZQ8 928 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 SHARPINQ9H0F6 387 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 SLCO5A1Q9H2Y9 848 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 PIGMQ9H3S5 423 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 PACSIN3Q9UKS6 424 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 CLCA3PQ9Y6N3 262 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 DYSFO75923 2080 aa14.03□□□□□ -0.16
CLSTN3-216ENST00000545663 TRRAPQ9Y4A5 3859 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 GFYI3L273 518 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 NDUFS7O75251 213 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 TNFSF13O75888 250 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 SMNDC1O75940 238 aaKnown RBP eCLIP14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 ADRA1DP25100 572 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 UGT2B10P36537 528 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 SKIV2L2P42285 1042 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 GNG11P61952 73 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 SKP1P63208 163 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 SLC13A2Q13183 592 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 RUNX2Q13950 521 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 EIPR1Q53HC9 387 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 PIGGQ5H8A4 983 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 ZNF474Q6S9Z5 364 aaPredicted RBP14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 LYPD8Q6UX82 237 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 DNM1P46Q6ZS02 220 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 C17orf64Q86WR6 236 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 TMEM132CQ8N3T6 1108 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 KRT35Q92764 455 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 PBKQ96KB5 322 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 ART5Q96L15 291 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 FRMD8P1Q9BZ68 369 aaPredicted RBP14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 OSBPL8Q9BZF1 889 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 AICDAQ9GZX7 198 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 SPNS1Q9H2V7 528 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 ADAP2Q9NPF8 381 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 PRTFDC1Q9NRG1 225 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 RIMKLBQ9ULI2 386 aa14.02□□□□□ -0.17
CLSTN3-216ENST00000545663 KLF4O43474 513 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 TRIM3O75382 744 aaPredicted RBP14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 IFNA16P05015 189 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 SMIM10L1P0DMW3 83 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 GRK3P35626 688 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 CDKN1AP38936 164 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 CD79BP40259 229 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 CDK9P50750 372 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 NAGLUP54802 743 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 DIO3P55073 304 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 CDH17Q12864 832 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 CUL1Q13616 776 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 RCAN2Q14206 197 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 ELAVL1Q15717 326 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 C12orf54Q6X4T0 127 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 MBOAT1Q6ZNC8 495 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 SH2D5Q6ZV89 423 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 ZNF611Q8N823 705 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 FAM13CQ8NE31 585 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 PPHLN1Q8NEY8 458 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 NT5CQ8TCD5 201 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 ZPLD1Q8TCW7 415 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 LPGAT1Q92604 370 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 ALG3Q92685 438 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 ABTB1Q969K4 478 aaPredicted RBP14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 C1orf159Q96HA4 380 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 SMIM10Q96HG1 83 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 LCORQ96JN0 433 aaPredicted RBP14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 GNRHR2Q96P88 292 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 DOHHQ9BU89 302 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 EIF2B3Q9NR50 452 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 CHRAC1Q9NRG0 131 aa14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 CNOT11Q9UKZ1 510 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-216ENST00000545663 CRYL1Q9Y2S2 319 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms