RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 INAQ16352 499 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 C20orf194Q5TEA3 1177 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 PRSS57Q6UWY2 283 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 UNC5DQ6UXZ4 953 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 RBM43Q6ZSC3 357 aaKnown RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 COX8CQ7Z4L0 72 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 RBM23Q86U06 439 aaKnown RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 APOBEC3FQ8IUX4 373 aaKnown RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 CIARTQ8N365 385 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 FBXW8Q8N3Y1 598 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 SIDT2Q8NBJ9 832 aaKnown RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 KBTBD8Q8NFY9 601 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 SECTM1Q8WVN6 248 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 METTL21AQ8WXB1 218 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 ESAMQ96AP7 390 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 FAM122AQ96E09 287 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 NSL1Q96IY1 281 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 ST6GAL2Q96JF0 529 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 NSMCE2Q96MF7 247 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 KCNK16Q96T55 309 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 CDCA3Q99618 268 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 DDX47Q9H0S4 455 aaKnown RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 PNNQ9H307 717 aaKnown RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 EVA1AQ9H8M9 152 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 RPF1Q9H9Y2 349 aaKnown RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 MYOZ2Q9NPC6 264 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 SOHLH2Q9NX45 425 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 NDUFA13Q9P0J0 144 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 FAF1Q9UNN5 650 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 PLEKHA6Q9Y2H5 1048 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 MRC1P22897 1456 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 TRIP12Q14669 1992 aaPredicted RBP3.65□□□□□ -1.82
SNHG1-222ENST00000545308 TCF20Q9UGU0 1960 aaKnown RBP3.65□□□□□ -1.82
SNHG1-222ENST00000545308 ARHGAP42A6NI28 874 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 RASGRF2O14827 1237 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 MLNRO43193 412 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 KIF5CO60282 957 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 ECE2O60344 883 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 PGK2P07205 417 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 YES1P07947 543 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 IGHV4-38-2P0DP08 117 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 RBMS1P29558 406 aaKnown RBP3.65□□□□□ -1.83
SNHG1-222ENST00000545308 AKT2P31751 481 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 CHRNA3P32297 505 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 OR1D2P34982 312 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 DCTP40126 519 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 CETN2P41208 172 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 CDKN2AP42771 156 aaKnown RBP3.65□□□□□ -1.83
SNHG1-222ENST00000545308 PITPNBP48739 271 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 TNFSF10P50591 281 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 CLCN4P51793 760 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF131P52739 623 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 DVL1P1P54792 670 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-222ENST00000545308 ILF3Q12906 894 aaKnown RBP eCLIP3.65□□□□□ -1.83
SNHG1-222ENST00000545308 PPP1R8Q12972 351 aaKnown RBP3.65□□□□□ -1.83
SNHG1-222ENST00000545308 CEBPEQ15744 281 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 LRIT3Q3SXY7 679 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 CCDC40Q4G0X9 1142 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 XKR6Q5GH73 641 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 TECRLQ5HYJ1 363 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 CD164L2Q6UWJ8 174 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 DHRS11Q6UWP2 260 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 ADCK1Q86TW2 530 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 PIGZQ86VD9 579 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 GBP7Q8N8V2 638 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-222ENST00000545308 SLC24A4Q8NFF2 622 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 OR13C3Q8NGS6 347 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 CD99L2Q8TCZ2 262 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 ULK4Q96C45 1275 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 ALG14Q96F25 216 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 C16orf58Q96GQ5 468 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 IGSF21Q96ID5 467 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 BTBD9Q96Q07 612 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 CTAGE1Q96RT6 745 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 ASCL2Q99929 193 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 C1QTNF4Q9BXJ3 329 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 MTMR12Q9C0I1 747 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 THAP2Q9H0W7 228 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 GPN1Q9HCN4 374 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-222ENST00000545308 NGBQ9NPG2 151 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 PSME4Q14997 1843 aa3.65□□□□□ -1.83
SNHG1-222ENST00000545308 SIPA1L3O60292 1781 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-222ENST00000545308 SNED1Q8TER0 1413 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 A0A0U1RRA0 63 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 CCDC162PA2VCL2 907 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 SNURFLB1AK76 121 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF732B4DXR9 585 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 C16orf97H3BN30 126 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 CPLX1O14810 134 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 CHUKO15111 745 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 GMNNO75496 209 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 DFFBO76075 338 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 GAS8O95995 478 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 HEXBP07686 556 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 ODC1P11926 461 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 KRT5P13647 590 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 FUT1P19526 365 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 CYP3A5P20815 502 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 OR3A3P47888 321 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms