RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	JPT2	Q9H910	190 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	DEPP	Q9NTK1	212 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	DNAJC11	Q9NVH1	559 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	THYN1	Q9P016	225 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	MAD2L2	Q9UI95	211 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	HCFC1	P51610	2035 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	ACOD1	A6NK06	481 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	KIN	O60870	393 aa	Known RBP	3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR6B1	O95007	311 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	CPNE6	O95741	557 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	IGHG1	P01857	330 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	CHRNG	P07510	517 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	HOXD4	P09016	255 aa	Predicted RBP	3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	CAPN2	P17655	700 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	CYP3A5	P20815	502 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	GPX3	P22352	226 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	LMO2	P25791	158 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	SMS	P52788	366 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	PEX3	P56589	373 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	LMO4	P61968	165 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	MSLN	Q13421	630 aa	Predicted RBP	3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	GIT2	Q14161	759 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	HEPACAM	Q14CZ8	416 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR1C1	Q15619	314 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	POM121L1P	Q3SYA9	428 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	TCTEX1D4	Q5JR98	221 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZNF841	Q6ZN19	808 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	CATSPER3	Q86XQ3	398 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	WDR49	Q8IV35	697 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	SFRP1	Q8N474	314 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	SIDT2	Q8NBJ9	832 aa	Known RBP	3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	C5orf30	Q96GV9	206 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	PCED1B	Q96HM7	432 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	RCHY1	Q96PM5	261 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	RAB40C	Q96S21	281 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	WWP1	Q9H0M0	922 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	EXOC7	Q9UPT5	735 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	NIP7	Q9Y221	180 aa	Known RBP eCLIP	3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	EXOC6B	Q9Y2D4	811 aa		3.39	□□□□□ -1.87
RAP1B-231	ENST00000544639	IGKV3D-20	A0A0C4DH25	116 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	LOC390937	A0A1W2PQ73	354 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	IGLON5	A6NGN9	336 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZNF724	A8MTY0	619 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	SHISA9	B4DS77	424 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	PSMD3	O43242	534 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	KIAA0513	O60268	411 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	CS	O75390	466 aa	Known RBP	3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR6A2	O95222	327 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	FH	P07954	510 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	CT45A8	P0DMV1	189 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	CT45A9	P0DMV2	189 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	B4GALT1	P15291	398 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	ACADS	P16219	412 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	GATA2	P23769	480 aa	Predicted RBP	3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	IL4R	P24394	825 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	GSK3B	P49841	420 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	TAF6	P49848	677 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	RIDA	P52758	137 aa	Known RBP	3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	UCP2	P55851	309 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	SLC8A3	P57103	927 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	KCNK10	P57789	538 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	KRTAP10-12	P60413	245 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	RPS27A	P62979	156 aa	Known RBP	3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	HSPA14	Q0VDF9	509 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	GK2	Q14410	553 aa	Predicted RBP	3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	STX1A	Q16623	288 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	WSCD2	Q2TBF2	565 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	CT45A2	Q5DJT8	189 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	MUC21	Q5SSG8	566 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	RPAIN	Q86UA6	219 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	SNX32	Q86XE0	403 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	STH	Q8IWL8	128 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	POM121L12	Q8N7R1	296 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	BANP	Q8N9N5	519 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	UBTD2	Q8WUN7	234 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	PCNP	Q8WW12	178 aa	Known RBP	3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	PYGO2	Q9BRQ0	406 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	RAB11FIP5	Q9BXF6	653 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	MARCH7	Q9H992	704 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	TECR	Q9NZ01	308 aa	Known RBP	3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	TEKT2	Q9UIF3	430 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	CSAG2	Q9Y5P2	127 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	COL5A2	P05997	1499 aa	Predicted RBP	3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	NOTCH3	Q9UM47	2321 aa		3.38	□□□□□ -1.87
RAP1B-231	ENST00000544639	BCLAF3	A2AJT9	711 aa	Known RBP	3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	KRTAP9-6	A8MVA2	160 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	TMCO5B	A8MYB1	307 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	OGT	O15294	1046 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	FRAT2	O75474	233 aa	Predicted RBP	3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	SLC1A6	P48664	564 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	PGF	P49763	221 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	RPL27	P61353	136 aa	Known RBP	3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	COX10	Q12887	443 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	FASTK	Q14296	549 aa	Known RBP	3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	LASP1	Q14847	261 aa	Known RBP	3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	SLC17A1	Q14916	467 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	C2orf76	Q3KRA6	126 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	SLC10A5	Q5PT55	438 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	C9orf66	Q5T8R8	295 aa		3.37	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms