RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 GRM7Q14831 915 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 GPR19Q15760 415 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 CLPPQ16740 277 aaPredicted RBP28.76■■■□□ 2.19
CCM2-219ENST00000544363 NIPAL1Q6NVV3 410 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 OR9A4Q8NGU2 314 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 CNDP2Q96KP4 475 aaKnown RBP28.76■■■□□ 2.19
CCM2-219ENST00000544363 ZNF583Q96ND8 569 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 SYNDIG1Q9H7V2 258 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 KAT8Q9H7Z6 458 aaKnown RBP28.76■■■□□ 2.19
CCM2-219ENST00000544363 PRDM9Q9NQV7 894 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 RALGAPA1Q6GYQ0 2036 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 EVPLLA8MZ36 301 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 TMEM150CB9EJG8 249 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 H3BMH7 237 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 LDOC1O95751 146 aaPredicted RBP28.75■■■□□ 2.19
CCM2-219ENST00000544363 FOLR1P15328 257 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 GAB1Q13480 694 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 SF3A2Q15428 464 aaKnown RBP28.75■■■□□ 2.19
CCM2-219ENST00000544363 ARHGAP22Q7Z5H3 698 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 CA13Q8N1Q1 262 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 TRIML2Q8N7C3 387 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 OR10A6Q8NH74 314 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 JADE3Q92613 823 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 PIF1Q9H611 641 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 TPT1P8Q9HAU6 139 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 GMEB1Q9Y692 573 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 SPACA6W5XKT8 324 aa28.75■■■□□ 2.19
CCM2-219ENST00000544363 GPR179Q6PRD1 2367 aa28.74■■■□□ 2.19
CCM2-219ENST00000544363 FOXS1O43638 330 aa28.74■■■□□ 2.19
CCM2-219ENST00000544363 CKMT2P17540 419 aa28.74■■■□□ 2.19
CCM2-219ENST00000544363 HTR1EP28566 365 aa28.74■■■□□ 2.19
CCM2-219ENST00000544363 MLC1Q15049 377 aa28.74■■■□□ 2.19
CCM2-219ENST00000544363 PTRH1Q86Y79 214 aaKnown RBP28.74■■■□□ 2.19
CCM2-219ENST00000544363 TTC29Q8NA56 475 aaPredicted RBP28.74■■■□□ 2.19
CCM2-219ENST00000544363 OR5T3Q8NGG3 340 aa28.74■■■□□ 2.19
CCM2-219ENST00000544363 ZFP90Q8TF47 636 aa28.74■■■□□ 2.19
CCM2-219ENST00000544363 PSME2Q9UL46 239 aa28.74■■■□□ 2.19
CCM2-219ENST00000544363 A0A0A6YYC8 382 aaPredicted RBP28.73■■■□□ 2.19
CCM2-219ENST00000544363 IGHV5-10-1A0A0J9YXX1 117 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 I3L1I5 382 aaPredicted RBP28.73■■■□□ 2.19
CCM2-219ENST00000544363 RDH16O75452 317 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 ERAL1O75616 437 aaKnown RBP28.73■■■□□ 2.19
CCM2-219ENST00000544363 OR2B3O76000 313 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 PPIBP23284 216 aaKnown RBP28.73■■■□□ 2.19
CCM2-219ENST00000544363 NTSP30990 170 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 ERFP50548 548 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 HIPK4Q8NE63 616 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 RHBDD1Q8TEB9 315 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 STMN2Q93045 179 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 BBS4Q96RK4 519 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 CSF3RQ99062 836 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 TRIM4Q9C037 500 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 MUC13Q9H3R2 512 aa28.73■■■□□ 2.19
CCM2-219ENST00000544363 RPF2Q9H7B2 306 aaKnown RBP28.73■■■□□ 2.19
CCM2-219ENST00000544363 MYO1GB0I1T2 1018 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 CDX4O14627 284 aaPredicted RBP28.72■■■□□ 2.19
CCM2-219ENST00000544363 NSA2O95478 260 aaKnown RBP28.72■■■□□ 2.19
CCM2-219ENST00000544363 OR52E8Q6IFG1 317 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 ZNF551Q7Z340 670 aaPredicted RBP28.72■■■□□ 2.19
CCM2-219ENST00000544363 BHLHE22Q8NFJ8 381 aaPredicted RBP28.72■■■□□ 2.19
CCM2-219ENST00000544363 NEUROD4Q9HD90 331 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 EGFL7Q9UHF1 273 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 USP22Q9UPT9 525 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 ENTPD4Q9Y227 616 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 PCDHB3Q9Y5E6 796 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 STAMBPO95630 424 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 C1QCP02747 245 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 GPX2P18283 190 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 OR4D2P58180 307 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 SLC14A1Q13336 389 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 FXNQ16595 210 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 GPR155Q7Z3F1 870 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 DHFR2Q86XF0 187 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 CALHM3Q86XJ0 350 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 OR1L3Q8NH93 324 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 FAM120BQ96EK7 910 aaKnown RBP28.72■■■□□ 2.19
CCM2-219ENST00000544363 CNRIP1Q96F85 164 aaPredicted RBP28.72■■■□□ 2.19
CCM2-219ENST00000544363 AMDHD1Q96NU7 426 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 GFM1Q96RP9 751 aaKnown RBP28.72■■■□□ 2.19
CCM2-219ENST00000544363 SLC35A5Q9BS91 424 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 GLIPR2Q9H4G4 154 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 GIMAP4Q9NUV9 329 aa28.72■■■□□ 2.19
CCM2-219ENST00000544363 MYO15AQ9UKN7 3530 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 PSMG1O95456 288 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 GZMMP51124 257 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 RAB38P57729 211 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 ABHD18Q0P651 414 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 TCF15Q12870 199 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 SPIDRQ14159 915 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 CEBPEQ15744 281 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 FAM214AQ32MH5 1076 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 CLEC4FQ8N1N0 589 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 DTWD1Q8N5C7 304 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 OR2T12Q8NG77 320 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 ZFP28Q8NHY6 868 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 CXorf36Q9H7Y0 433 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 ACTR3BQ9P1U1 418 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 SERTAD3Q9UJW9 196 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 CORO2BQ9UQ03 480 aa28.71■■■□□ 2.19
CCM2-219ENST00000544363 ZNF780BQ9Y6R6 833 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms