RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZNF732B4DXR9 585 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 M0R296 226 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 PSMD3O43242 534 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 SAP30O75446 220 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 CLPTM1O96005 669 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 MAPK3P27361 379 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-207ENST00000544052 MAP2K2P36507 400 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 CD86P42081 329 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 SLC3A1Q07837 685 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 TRIM29Q14134 588 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 ZRSR1Q15695 479 aaKnown RBP3.28□□□□□ -1.88
SCFD1-207ENST00000544052 STPG1Q5TH74 334 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 CEACAM20Q6UY09 585 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 STHQ8IWL8 128 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 GPC2Q8N158 579 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 HAS2Q92819 552 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 LPAR4Q99677 370 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 THUMPD2Q9BTF0 503 aaKnown RBP3.28□□□□□ -1.88
SCFD1-207ENST00000544052 XPO4Q9C0E2 1151 aaKnown RBP3.28□□□□□ -1.88
SCFD1-207ENST00000544052 FAM49AQ9H0Q0 323 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-207ENST00000544052 MTIF3Q9H2K0 278 aaKnown RBP3.28□□□□□ -1.88
SCFD1-207ENST00000544052 KCNMB3Q9NPA1 279 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF624Q9P2J8 865 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-207ENST00000544052 SATB2Q9UPW6 733 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 A0A087WUV0 522 aaPredicted RBP3.28□□□□□ -1.89
SCFD1-207ENST00000544052 SLC15A5A6NIM6 579 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 A8MVM7 634 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 CDC123O75794 336 aaPredicted RBP3.28□□□□□ -1.89
SCFD1-207ENST00000544052 SEC24AO95486 1093 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 ALPPP05187 535 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 ERVK-10P10266 1014 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 ALPPL2P10696 532 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 ODC1P11926 461 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 EZRP15311 586 aaKnown RBP3.28□□□□□ -1.89
SCFD1-207ENST00000544052 POU3F1Q03052 451 aaPredicted RBP3.28□□□□□ -1.89
SCFD1-207ENST00000544052 TMEM132DQ14C87 1099 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 PTPN14Q15678 1187 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 LRRC37A5PQ49AS3 106 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 SLC35E4Q6ICL7 350 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 ZCCHC12Q6PEW1 402 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 LACC1Q8IV20 430 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 TMEM178AQ8NBL3 297 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 OR4A16Q8NH70 328 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 KIAA1524Q8TCG1 905 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 CD99L2Q8TCZ2 262 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 RSPH1Q8WYR4 309 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 BPIFA2Q96DR5 249 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 CFAP36Q96G28 342 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF577Q9BSK1 485 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 TEX13AQ9BXU3 409 aaPredicted RBP3.28□□□□□ -1.89
SCFD1-207ENST00000544052 KRT23Q9C075 422 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 WWTR1Q9GZV5 400 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 TSPYL1Q9H0U9 437 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 ZDHHC6Q9H6R6 413 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF71Q9NQZ8 489 aaPredicted RBP3.28□□□□□ -1.89
SCFD1-207ENST00000544052 MIS18AQ9NYP9 233 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 EPHA6Q9UF33 1036 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 UBQLN2Q9UHD9 624 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 NUDCQ9Y266 331 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 SH3GLB1Q9Y371 365 aa3.28□□□□□ -1.89
SCFD1-207ENST00000544052 MYH3P11055 1940 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 RIC1Q4ADV7 1423 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 UBN2Q6ZU65 1347 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 FAM172BPA6NC97 362 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 MSGN1A6NI15 193 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 CCDC69A6NI79 296 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 TEX28O15482 410 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 PRPSAP2O60256 369 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 B3GALNT1O75752 331 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 GRAP2O75791 330 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 GAS8O95995 478 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 PRSS1P07477 247 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 SLC2A2P11168 524 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-207ENST00000544052 SKILP12757 684 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 RPL35AP18077 110 aaKnown RBP3.27□□□□□ -1.89
SCFD1-207ENST00000544052 ITGB6P18564 788 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 OR3A3P47888 321 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 PITPNBP48739 271 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 CNN1P51911 297 aaKnown RBP3.27□□□□□ -1.89
SCFD1-207ENST00000544052 HUNKP57058 714 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF74Q16587 644 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 DUSP5Q16690 384 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 PRAMEF7Q5VXH5 474 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 MFSD7Q6UXD7 560 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 LEKR1Q6ZMV7 388 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 FCRLAQ7L513 359 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 TRMT11Q7Z4G4 463 aaKnown RBP3.27□□□□□ -1.89
SCFD1-207ENST00000544052 FBXW8Q8N3Y1 598 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 TRPV3Q8NET8 790 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 GPRC5AQ8NFJ5 357 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 GIMAP5Q96F15 307 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 PKP2Q99959 881 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 C1orf21Q9H246 121 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 SDF2L1Q9HCN8 221 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 MAN2C1Q9NTJ4 1040 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 HACD3Q9P035 362 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 FBXL4Q9UKA2 621 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 PILRAQ9UKJ1 303 aa3.27□□□□□ -1.89
SCFD1-207ENST00000544052 ETV7Q9Y603 341 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms