RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SRA1Q9HD15 236 aaKnown RBP14.86□□□□□ -0.03
CHD4-210ENST00000544040 WRAP73Q9P2S5 460 aaPredicted RBP14.86□□□□□ -0.03
CHD4-210ENST00000544040 ADAMTS6Q9UKP5 1117 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 FRMPD1Q5SYB0 1578 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 CAMLGP49069 296 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 ECH1Q13011 328 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 LRIT3Q3SXY7 679 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 PLEKHN1Q494U1 663 aaPredicted RBP14.86□□□□□ -0.03
CHD4-210ENST00000544040 OR56A3Q8NH54 315 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 THAP3Q8WTV1 239 aaPredicted RBP14.86□□□□□ -0.03
CHD4-210ENST00000544040 C2orf15Q8WU43 125 aaKnown RBP14.86□□□□□ -0.03
CHD4-210ENST00000544040 ZNF599Q96NL3 588 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 NRP1O14786 923 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 SSX4O60224 188 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 STSP08842 583 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 GABRA3P34903 492 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 MOGSQ13724 837 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 PRRT3Q5FWE3 981 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 ADGRF1Q5T601 910 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 SCML4Q8N228 414 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 NSUN5Q96P11 429 aaKnown RBP14.86□□□□□ -0.03
CHD4-210ENST00000544040 B3GALT1Q9Y5Z6 326 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 A0A0U1RQK1 487 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 FRKP42685 505 aaPredicted RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 FASLGP48023 281 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 LRFN4Q6PJG9 635 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 SMG9Q9H0W8 520 aaKnown RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 ZNF821O75541 412 aaPredicted RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 RGS9O75916 674 aaPredicted RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 BEST1O76090 585 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 HOXA10P31260 410 aaPredicted RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 SLC18A1P54219 525 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 GALK2Q01415 458 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 C15orf52Q6ZUT6 534 aaKnown RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 NTAN1Q96AB6 310 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 OR6C6A6NF89 314 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 POLR2CP19387 275 aaPredicted RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 CAPN3P20807 821 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 UQCRC2P22695 453 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 AK4P27144 223 aaPredicted RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 POU6F2P78424 691 aaPredicted RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 TWNKQ96RR1 684 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 HDHD5Q9BXW7 423 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 PPRC1Q5VV67 1664 aaKnown RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 SCO2O43819 266 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 OAS1P00973 400 aaKnown RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 CDKN2CP42773 168 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 MAGEA6P43360 314 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 SLC25A11Q02978 314 aaKnown RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 METTL25Q8N6Q8 603 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 OR4C15Q8NGM1 316 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 ZNF420Q8TAQ5 688 aaPredicted RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 PROKR1Q8TCW9 393 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 FBXL12Q9NXK8 326 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 ZNF254O75437 659 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 RASAL1O95294 804 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 CHRNA1P02708 482 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 GRB7Q14451 532 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 TXNDC5Q8NBS9 432 aaKnown RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 OR2AP1Q8NGE2 309 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 WFIKKN2Q8TEU8 576 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 GLYATL2Q8WU03 294 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 CLEC4DQ8WXI8 215 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 ZUFSPQ96AP4 578 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 NEDD4LQ96PU5 975 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 DPH2Q9BQC3 489 aaPredicted RBP14.85□□□□□ -0.03
CHD4-210ENST00000544040 PSAT1Q9Y617 370 aa14.85□□□□□ -0.03
CHD4-210ENST00000544040 H7BY64 318 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 HEXBP07686 556 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 ZBTB48P10074 688 aaPredicted RBP14.84□□□□□ -0.03
CHD4-210ENST00000544040 IFNGR1P15260 489 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 FOSL1P15407 271 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 CAV3P56539 151 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 PER3P56645 1201 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 HNRNPKP61978 463 aaKnown RBP eCLIP14.84□□□□□ -0.038e-7■■■■■ 27.2
CHD4-210ENST00000544040 ZNF763Q0D2J5 394 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 ELP2Q6IA86 826 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 CCBE1Q6UXH8 406 aaPredicted RBP14.84□□□□□ -0.03
CHD4-210ENST00000544040 ACDQ96AP0 544 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 PRAP1Q96NZ9 151 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 KATNBL1Q9H079 304 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 PCDHB16Q9NRJ7 776 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 FAIMQ9NVQ4 179 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 ICKQ9UPZ9 632 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 TRBV2A0A0J9YWF9 115 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 CTBP2P56545 445 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 OGDHQ02218 1023 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 NTRK2Q16620 822 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 ZNF423Q2M1K9 1284 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 MEDAGQ5VYS4 303 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 ZNF572Q7Z3I7 529 aaPredicted RBP14.84□□□□□ -0.03
CHD4-210ENST00000544040 ZER1Q7Z7L7 766 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 OR9A1PQ8NGU1 263 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 CCDC106Q9BWC9 280 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 REEP4Q9H6H4 257 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 ASB6Q9NWX5 421 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 COPZ2Q9P299 210 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 MT-ND2P03891 347 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 FAM110CQ1W6H9 321 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms