RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 IFNA16P05015 189 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FREM3P0C091 2139 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 EDN3P14138 238 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TNNI3P19429 210 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TAC1P20366 129 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CPN2P22792 545 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TLX1P31314 330 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ARL1P40616 181 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SSR2P43308 183 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CLCN2P51788 898 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 GPR143P51810 404 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RAP1GDS1P52306 607 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MLF1P58340 268 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CUL3Q13618 768 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TUBA3CQ13748 450 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TERF2Q15554 542 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ZRSR2Q15696 482 aaKnown RBP9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 INAQ16352 499 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ZNF766Q5HY98 468 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TUBA3EQ6PEY2 450 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FAM180AQ6UWF9 173 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MILR1Q7Z6M3 343 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CLNKQ7Z7G1 428 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 GPR180Q86V85 440 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 LCA5Q86VQ0 697 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 KIF2BQ8N4N8 673 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 HORMAD2Q8N7B1 307 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ZNF511Q8NB15 262 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 B3GNT7Q8NFL0 401 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 WDR20Q8TBZ3 569 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ACMSDQ8TDX5 336 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MTFMTQ96DP5 389 aaKnown RBP9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CSF3RQ99062 836 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 EPB41L4BQ9H329 900 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ADAP2Q9NPF8 381 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 DMRT3Q9NQL9 472 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MS4A12Q9NXJ0 267 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PSMC3IPQ9P2W1 217 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PCTPQ9UKL6 214 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FBXW2Q9UKT8 454 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CLDN16Q9Y5I7 305 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CLCA3PQ9Y6N3 262 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 DNAJC13O75165 2243 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 GABRR3A8MPY1 467 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TGFBR3LH3BV60 316 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PLPP1O14494 284 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PROM1O43490 865 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZFAND5O76080 213 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 GSTA1P08263 222 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SBK3P0C264 359 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TPP2P29144 1249 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PPP2R1BP30154 601 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 NEK2P51955 445 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OC90Q02509 493 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SERTAD2Q14140 314 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OR1C1Q15619 314 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ELAVL1Q15717 326 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 C10orf62Q5T681 223 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZNF324BQ6AW86 544 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TTC19Q6DKK2 380 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SPINK14Q6IE38 97 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 HDXQ7Z353 690 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ARMC10Q8N2F6 343 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZCCHC7Q8N3Z6 543 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 APCDD1LQ8NCL9 501 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 MORN4Q8NDC4 146 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 MDS2Q8NDY4 140 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OR52B6Q8NGF0 335 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZNF483Q8TF39 744 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TANKQ92844 425 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 DAZLQ92904 295 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 NCLNQ969V3 563 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ANKRD9Q96BM1 317 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 VMP1Q96GC9 406 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SIGLEC12Q96PQ1 595 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CDK15Q96Q40 435 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TAAR6Q96RI8 345 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SERPINI1Q99574 410 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SORBS1Q9BX66 1292 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 C1QTNF3Q9BXJ4 246 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 RPF2Q9H7B2 306 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 DDX31Q9H8H2 851 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZBTB26Q9HCK0 441 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SEMA4BQ9NPR2 832 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OLAHQ9NV23 265 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ANKRD10Q9NXR5 420 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 AHSPQ9NZD4 102 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TMEM216Q9P0N5 145 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 LRFN1Q9P244 771 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 DCDC2Q9UHG0 476 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PHF11Q9UIL8 331 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PPT2Q9UMR5 302 aa9.08□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TRBV11-1A0A0K0K1C0 115 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 MYOCOSA0A1B0GUC4 107 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 A8MT66 165 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 FCHO1O14526 889 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 LDB3O75112 727 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SEMA7AO75326 666 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 DDAH2O95865 285 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OTCP00480 354 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms