RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 C16orf78Q8WTQ4 265 aa11.46□□□□□ -0.57
DDX55-210ENST00000543016 SNRNP27Q8WVK2 155 aaKnown RBP11.46□□□□□ -0.57
DDX55-210ENST00000543016 MTERF3Q96E29 417 aa11.46□□□□□ -0.57
DDX55-210ENST00000543016 PTCHD1Q96NR3 888 aa11.46□□□□□ -0.57
DDX55-210ENST00000543016 CATSPER2Q96P56 530 aa11.46□□□□□ -0.57
DDX55-210ENST00000543016 PELOQ9BRX2 385 aaKnown RBP11.46□□□□□ -0.57
DDX55-210ENST00000543016 CCDC28BQ9BUN5 200 aa11.46□□□□□ -0.57
DDX55-210ENST00000543016 VN1R1Q9GZP7 353 aa11.46□□□□□ -0.57
DDX55-210ENST00000543016 SOX17Q9H6I2 414 aaPredicted RBP11.46□□□□□ -0.57
DDX55-210ENST00000543016 WDR70Q9NW82 654 aa11.46□□□□□ -0.57
DDX55-210ENST00000543016 CHD8Q9HCK8 2581 aa11.46□□□□□ -0.58
DDX55-210ENST00000543016 IGKV3D-11A0A0A0MRZ8 115 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 TAF4O00268 1085 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 EFSO43281 561 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 TBX19O60806 448 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 GPR75O95800 540 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 AIFM1O95831 613 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 GBAP04062 536 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 JUNP05412 331 aaKnown RBP11.45□□□□□ -0.58
DDX55-210ENST00000543016 BCKDHAP12694 445 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 TAS2R50P59544 299 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 AP2B1P63010 937 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 STX4Q12846 297 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 SLC13A2Q13183 592 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 TERF2Q15554 542 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 NSDHLQ15738 373 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 IL23RQ5VWK5 629 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 R3HCC1LQ7Z5L2 792 aaKnown RBP11.45□□□□□ -0.58
DDX55-210ENST00000543016 LAPTM4BQ86VI4 370 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 NATD1Q8N6N6 113 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 FAM47BQ8NA70 645 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 ADAMTS17Q8TE56 1095 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 CHMP6Q96FZ7 201 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 FER1L6-AS2Q96M78 137 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 ZNF317Q96PQ6 595 aaPredicted RBP11.45□□□□□ -0.58
DDX55-210ENST00000543016 MRGBPQ9NV56 204 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 TAS2R7Q9NYW3 318 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 DLGAP4Q9Y2H0 992 aa11.45□□□□□ -0.58
DDX55-210ENST00000543016 POLR3HQ9Y535 204 aaPredicted RBP11.45□□□□□ -0.58
DDX55-210ENST00000543016 TCRBV16S1A1N1A0A5B0 115 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 FAM227AF5H4B4 570 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 K7ENP7 123 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 POLR3GO15318 223 aaPredicted RBP11.44□□□□□ -0.58
DDX55-210ENST00000543016 DIAPH2O60879 1101 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 JRKO75564 520 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 ICAM2P13598 275 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 SDC1P18827 310 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 DDCP20711 480 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 PRPS1L1P21108 318 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 EPHA3P29320 983 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 GALNSP34059 522 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 RRADP55042 308 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 AQP5P55064 265 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 C21orf58P58505 322 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 IGLV3-21P80748 117 aaPredicted RBP11.44□□□□□ -0.58
DDX55-210ENST00000543016 ACTN3Q08043 901 aaPredicted RBP11.44□□□□□ -0.58
DDX55-210ENST00000543016 VAC14Q08AM6 782 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 C2orf80Q0P641 193 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 ERV3-1Q14264 604 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 GSTA3Q16772 222 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 FAM219BQ5XKK7 198 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 C18orf63Q68DL7 685 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 FAM71E1Q6IPT2 247 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 SLC48A1Q6P1K1 146 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 INO80CQ6PI98 192 aaPredicted RBP11.44□□□□□ -0.58
DDX55-210ENST00000543016 PPP1R32Q7Z5V6 425 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 PRSS58Q8IYP2 241 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 OR4K14Q8NGD5 310 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 DNAJB14Q8TBM8 379 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 CSF3RQ99062 836 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 PRPF18Q99633 342 aaKnown RBP11.44□□□□□ -0.58
DDX55-210ENST00000543016 EBPLQ9BY08 206 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 TCF7L2Q9NQB0 619 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 MIEF1Q9NQG6 463 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 GIMAP4Q9NUV9 329 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 TMEM45AQ9NWC5 275 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 TEX10Q9NXF1 929 aaPredicted RBP11.44□□□□□ -0.58
DDX55-210ENST00000543016 POLHQ9Y253 713 aa11.44□□□□□ -0.58
DDX55-210ENST00000543016 SRRM3A6NNA2 597 aaPredicted RBP11.43□□□□□ -0.58
DDX55-210ENST00000543016 DYRK3O43781 588 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 KLHL41O60662 606 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 CDC123O75794 336 aaPredicted RBP11.43□□□□□ -0.58
DDX55-210ENST00000543016 IL3P08700 152 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 SLC35E2P0CK97 266 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 COX7A2P14406 83 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 IDO1P14902 403 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 CSNK2A2P19784 350 aaPredicted RBP11.43□□□□□ -0.58
DDX55-210ENST00000543016 PIK3R1P27986 724 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 OTX2P32243 289 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 LSP1P33241 339 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 HPCAL1P37235 193 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 IDH3AP50213 366 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 CLDN8P56748 225 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 RPS18P62269 152 aaKnown RBP11.43□□□□□ -0.58
DDX55-210ENST00000543016 BTG2P78543 158 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 CDC20Q12834 499 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 METTL21CQ5VZV1 264 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 NXNQ6DKJ4 435 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 SHISA6Q6ZSJ9 500 aa11.43□□□□□ -0.58
DDX55-210ENST00000543016 NDUFAF7Q7L592 441 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms