RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 TACR1P25103 407 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 EMP2P54851 167 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 SSPNQ14714 243 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 FAM69BQ5VUD6 431 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 QSOX2Q6ZRP7 698 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 IKBIPQ70UQ0 350 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 SPATA19Q7Z5L4 167 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 TMEM52Q8NDY8 209 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 PLPP5Q8NEB5 264 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 STON2Q8WXE9 905 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 OR52B2Q96RD2 323 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 EBF4Q9BQW3 602 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 TCF7L2Q9NQB0 619 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 PRTFDC1Q9NRG1 225 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 SEMA3GQ9NS98 782 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 DCTN4Q9UJW0 460 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 RAXQ9Y2V3 346 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 MRPS18BQ9Y676 258 aaKnown RBP16.11■□□□□ 0.17
LIG1-204ENST00000542460 FER1L5A0AVI2 2057 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 GMNCA6NCL1 334 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 OR2W5A6NFC9 320 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 CTNSO60931 367 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 IGHEP01854 428 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 DRD2P14416 443 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 ASMTP46597 345 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 HNRNPFP52597 415 aaKnown RBP16.1■□□□□ 0.17
LIG1-204ENST00000542460 BTG2P78543 158 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 RHAGQ02094 409 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 SLC13A2Q13183 592 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 LSM12Q3MHD2 195 aaKnown RBP16.1■□□□□ 0.17
LIG1-204ENST00000542460 LRRC69Q6ZNQ3 347 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 SPACA3Q8IXA5 215 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 LIX1Q8N485 282 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 RFWD2Q8NHY2 731 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 CDC26Q8NHZ8 85 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 STARD8Q92502 1023 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 NACC2Q96BF6 587 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 PTCHD1Q96NR3 888 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 DCBLD2Q96PD2 775 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 CCDC28BQ9BUN5 200 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 KCNK13Q9HB14 408 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 BAIAP2L1Q9UHR4 511 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 PCDHA9Q9Y5H5 950 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 DMXL2Q8TDJ6 3036 aa16.1■□□□□ 0.17
LIG1-204ENST00000542460 A0A0G2JND7 137 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 GLOD5A6NK44 160 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 PCDH17O14917 1159 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 PGRMC2O15173 223 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 PRKRAO75569 313 aaKnown RBP16.09■□□□□ 0.17
LIG1-204ENST00000542460 G6PDP11413 515 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 PCSK2P16519 638 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 PPP2R1BP30154 601 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 SEC24CP53992 1094 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 DIO3P55073 304 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 C2orf80Q0P641 193 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 SRSF6Q13247 344 aaKnown RBP16.09■□□□□ 0.17
LIG1-204ENST00000542460 NSDHLQ15738 373 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 OR52E8Q6IFG1 317 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 FAM71E1Q6IPT2 247 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 CGB2Q6NT52 195 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 TMEM151BQ8IW70 566 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 SCUBE1Q8IWY4 988 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 FAM9CQ8IZT9 166 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 C7orf57Q8NEG2 295 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 METTL21AQ8WXB1 218 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 EGLN2Q96KS0 407 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 TSSK3Q96PN8 268 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 ADAM21Q9UKJ8 722 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 PSME2Q9UL46 239 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 LAMA5O15230 3695 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 TAF4O00268 1085 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 ALOX12BO75342 701 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 C8orf89P0DMQ9 161 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 DDCP20711 480 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 MAOAP21397 527 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 MMP11P24347 488 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 ALDH9A1P49189 494 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 EFNA3P52797 238 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 MC1RQ01726 317 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 PTGR1Q14914 329 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 BROXQ5VW32 411 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 SLC48A1Q6P1K1 146 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 RIPOR1Q6ZS17 1223 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 CLNKQ7Z7G1 428 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 DNAJB14Q8TBM8 379 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 NSRP1Q9H0G5 558 aaKnown RBP16.09■□□□□ 0.17
LIG1-204ENST00000542460 EHD3Q9NZN3 535 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 KLHL14Q9P2G3 628 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 HEY2Q9UBP5 337 aa16.09■□□□□ 0.17
LIG1-204ENST00000542460 IGKV3D-11A0A0A0MRZ8 115 aa16.08■□□□□ 0.16
LIG1-204ENST00000542460 SYNDIG1LA6NDD5 238 aa16.08■□□□□ 0.16
LIG1-204ENST00000542460 UBDO15205 165 aa16.08■□□□□ 0.16
LIG1-204ENST00000542460 LDB3O75112 727 aa16.08■□□□□ 0.16
LIG1-204ENST00000542460 ALDOCP09972 364 aaKnown RBP16.08■□□□□ 0.16
LIG1-204ENST00000542460 ACTN3Q08043 901 aaPredicted RBP16.08■□□□□ 0.16
LIG1-204ENST00000542460 STX4Q12846 297 aa16.08■□□□□ 0.16
LIG1-204ENST00000542460 BIKQ13323 160 aa16.08■□□□□ 0.16
LIG1-204ENST00000542460 UGT8Q16880 541 aa16.08■□□□□ 0.16
LIG1-204ENST00000542460 CRTC2Q53ET0 693 aaPredicted RBP16.08■□□□□ 0.16
LIG1-204ENST00000542460 FAAH2Q6GMR7 532 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms