RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 CBSLP0DN79 551 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 CTSEP14091 401 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 LHCGRP22888 699 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 TEAD1P28347 426 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 HNRNPH3P31942 346 aaKnown RBP7.82□□□□□ -1.16
MRPS35-204ENST00000542199 SERPINB6P35237 376 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 CBSP35520 551 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 ARSEP51690 589 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 CDH6P55285 790 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 UBASH3AP57075 661 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 TRAF2Q12933 501 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 PNCKQ6P2M8 343 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 ALKBH5Q6P6C2 394 aaKnown RBP7.82□□□□□ -1.16
MRPS35-204ENST00000542199 CYP20A1Q6UW02 462 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 LCTLQ6UWM7 567 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 TRILQ7L0X0 811 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 TEX26Q8N6G2 289 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 OR6C4Q8NGE1 309 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 WDR36Q8NI36 951 aaKnown RBP7.82□□□□□ -1.16
MRPS35-204ENST00000542199 ZNF48Q96MX3 618 aaPredicted RBP7.82□□□□□ -1.16
MRPS35-204ENST00000542199 GFM1Q96RP9 751 aaKnown RBP7.82□□□□□ -1.16
MRPS35-204ENST00000542199 LGMNQ99538 433 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 SLC6A13Q9NSD5 602 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 APPL1Q9UKG1 709 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 GPR34Q9UPC5 381 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 PPIL1Q9Y3C6 166 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 KCNE2Q9Y6J6 123 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 NBASA2RRP1 2371 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 UNC13CQ8NB66 2214 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 PCSK5Q92824 1860 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 KIF26BQ2KJY2 2108 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 A8MX80 341 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 CDRT15L2A8MXV6 281 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 D6RAR5 112 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 PSMD11O00231 422 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 PGLSO95336 258 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 CD48P09326 243 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 ARSBP15848 533 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 NFKBIAP25963 317 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 RBMS1P29558 406 aaKnown RBP7.81□□□□□ -1.16
MRPS35-204ENST00000542199 GARSP41250 739 aaKnown RBP7.81□□□□□ -1.16
MRPS35-204ENST00000542199 UCNP55089 124 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 MAXP61244 160 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 TPM4P67936 248 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 DPYSL3Q14195 570 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 FGFBP1Q14512 234 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 HNF4GQ14541 408 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 MED22Q15528 200 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 MARC1Q5VT66 337 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 ZNF367Q7RTV3 350 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 HSD11B1LQ7Z5J1 315 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 TECPR1Q7Z6L1 1165 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 C17orf82Q86X59 251 aaPredicted RBP7.81□□□□□ -1.16
MRPS35-204ENST00000542199 BBS5Q8N3I7 341 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 TMEM116Q8NCL8 245 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 NSMCE1Q8WV22 266 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 SNRNP27Q8WVK2 155 aaKnown RBP7.81□□□□□ -1.16
MRPS35-204ENST00000542199 PIH1D2Q8WWB5 315 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 KCNE4Q8WWG9 221 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 SNAPC3Q92966 411 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 FAF2Q96CS3 445 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 NUS1Q96E22 293 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 DTD2Q96FN9 168 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 SCRN2Q96FV2 425 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 WDFY2Q96P53 400 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 MRPL40Q9NQ50 206 aaKnown RBP7.81□□□□□ -1.16
MRPS35-204ENST00000542199 PTPN13Q12923 2485 aa7.81□□□□□ -1.16
MRPS35-204ENST00000542199 NAV2Q8IVL1 2488 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 LRRK1Q38SD2 2015 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 RELNP78509 3460 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 PRSS47A8MTI9 375 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 TMX2-CTNND1H3BSU7 103 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 SEC14L5O43304 696 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 NUDT21O43809 227 aaKnown RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 MFSD11O43934 449 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 PAGE4O60829 102 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 PROSCO94903 275 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 SOD1P00441 154 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 LCATP04180 440 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 RPLP0P05388 317 aaKnown RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 ETFAP13804 333 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 GNLYP22749 145 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 CASP14P31944 242 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 CCKBRP32239 447 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 CCL7P80098 99 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 CDK3Q00526 305 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 EIF3IQ13347 325 aaKnown RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 FRG1Q14331 258 aaKnown RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 KRT81Q14533 505 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 IHHQ14623 411 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 PAFAH1B3Q15102 231 aaKnown RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 ASTE1Q2TB18 679 aaPredicted RBP7.8□□□□□ -1.16
MRPS35-204ENST00000542199 CCDC122Q5T0U0 273 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 ARMC12Q5T9G4 340 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 NCBP2-AS2Q69YL0 99 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 SPECC1LQ69YQ0 1117 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 MZT2BQ6NZ67 158 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 NEK10Q6ZWH5 1172 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 TAF8Q7Z7C8 310 aa7.8□□□□□ -1.16
MRPS35-204ENST00000542199 TSPAN33Q86UF1 283 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms