RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 OOEPA6NGQ2 149 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 ZNF724A8MTY0 619 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 NEDD8-MDP1E9PL57 170 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 RAD51DO75771 328 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 LYNP07948 512 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 GJB2P29033 226 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 RPL34P49207 117 aaKnown RBP4.52□□□□□ -1.69
YBX3-210ENST00000540975 SIGLEC15Q6ZMC9 328 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 CLEC1AQ8NC01 280 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 LIME1Q9H400 295 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 CUEDC2Q9H467 287 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 SRD5A3Q9H8P0 318 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 RBM28Q9NW13 759 aaKnown RBP4.52□□□□□ -1.69
YBX3-210ENST00000540975 SMC3Q9UQE7 1217 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 FBXO7Q9Y3I1 522 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 NAALAD2Q9Y3Q0 740 aa4.52□□□□□ -1.69
YBX3-210ENST00000540975 MAGEB16A2A368 324 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 SDR42E2A6NKP2 422 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 ODC1P11926 461 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 PEX19P40855 299 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 MATKP42679 507 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 SLC3A1Q07837 685 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 PTK6Q13882 451 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 CDC37Q16543 378 aaPredicted RBP4.51□□□□□ -1.69
YBX3-210ENST00000540975 IQCCQ4KMZ1 466 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 VWA2Q5GFL6 755 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 LINC00242Q5T6M2 205 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 AGAP6Q5VW22 663 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 ARMCX5Q6P1M9 558 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 ALKBH5Q6P6C2 394 aaKnown RBP4.51□□□□□ -1.69
YBX3-210ENST00000540975 RFWD3Q6PCD5 774 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 CCDC71Q8IV32 467 aaPredicted RBP4.51□□□□□ -1.69
YBX3-210ENST00000540975 RSPH1Q8WYR4 309 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 CDHR1Q96JP9 859 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 CCDC114Q96M63 670 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 PNNQ9H307 717 aaKnown RBP4.51□□□□□ -1.69
YBX3-210ENST00000540975 TNFRSF19Q9NS68 423 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 CDH7Q9ULB5 785 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 NACADO15069 1562 aa4.51□□□□□ -1.69
YBX3-210ENST00000540975 FHP07954 510 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 PPP2R1AP30153 589 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 ID1P41134 155 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 ARHGAP1Q07960 439 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 RUNX3Q13761 415 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 PCK2Q16822 640 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 CCBE1Q6UXH8 406 aaPredicted RBP4.5□□□□□ -1.69
YBX3-210ENST00000540975 ZNF444Q8N0Y2 327 aaPredicted RBP4.5□□□□□ -1.69
YBX3-210ENST00000540975 CD177Q8N6Q3 437 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 ITFG2Q969R8 447 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 FAM210AQ96ND0 272 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 MLPHQ9BV36 600 aaPredicted RBP4.5□□□□□ -1.69
YBX3-210ENST00000540975 SLITRK2Q9H156 845 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 CWC25Q9NXE8 425 aaPredicted RBP4.5□□□□□ -1.69
YBX3-210ENST00000540975 MIS18AQ9NYP9 233 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 DHRS4-AS1Q9P1J3 65 aa4.5□□□□□ -1.69
YBX3-210ENST00000540975 ARMCX3Q9UH62 379 aaPredicted RBP4.5□□□□□ -1.69
YBX3-210ENST00000540975 UMODL1Q5DID0 1318 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 A0A087X0K7 114 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 TMCO5BA8MYB1 307 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 CCSO14618 274 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 SYT7O43581 403 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 SRPX2O60687 465 aaPredicted RBP4.49□□□□□ -1.69
YBX3-210ENST00000540975 NME6O75414 186 aaPredicted RBP4.49□□□□□ -1.69
YBX3-210ENST00000540975 IGHDP01880 384 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 KLK2P20151 261 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 CCR4P51679 360 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 RBP5P82980 135 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 BFSP1Q12934 665 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 PRR30Q53SZ7 412 aaPredicted RBP4.49□□□□□ -1.69
YBX3-210ENST00000540975 CAPN13Q6MZZ7 669 aaPredicted RBP4.49□□□□□ -1.69
YBX3-210ENST00000540975 NHLRC1Q6VVB1 395 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 ZNF730Q6ZMV8 503 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 CYP4V2Q6ZWL3 525 aaPredicted RBP4.49□□□□□ -1.69
YBX3-210ENST00000540975 SERINC5Q86VE9 423 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 ZSCAN30Q86W11 494 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 HSCBQ8IWL3 235 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 AQP12AQ8IXF9 295 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 OR6T1Q8NGN1 323 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 ZNF559Q9BR84 538 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 NT5DC2Q9H857 520 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 TUFT1Q9NNX1 390 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 CUTCQ9NTM9 273 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 SEPT10Q9P0V9 454 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 DNAJB9Q9UBS3 223 aa4.49□□□□□ -1.69
YBX3-210ENST00000540975 ATP6AP2A0A1C7CYW4 349 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 H0YIG0 161 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 E2F3O00716 465 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 ATP9AO75110 1047 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 OR6A2O95222 327 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 SLU7O95391 586 aaKnown RBP4.48□□□□□ -1.69
YBX3-210ENST00000540975 TNNT2P45379 298 aaPredicted RBP4.48□□□□□ -1.69
YBX3-210ENST00000540975 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 PPIAP62937 165 aaKnown RBP4.48□□□□□ -1.69
YBX3-210ENST00000540975 SLC34A1Q06495 639 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 NHSL2Q5HYW2 709 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 C1QTNF12Q5T7M4 302 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 LIPJQ5W064 366 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 SNRNP48Q6IEG0 339 aaKnown RBP4.48□□□□□ -1.69
YBX3-210ENST00000540975 ATAD1Q8NBU5 361 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 MRAPQ8TCY5 172 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms