RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	IGLON5	A6NGN9	336 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	METTL12	A8MUP2	240 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CENPBD1	B2RD01	187 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783		K7ERQ8	282 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SCO2	O43819	266 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ICMT	O60725	284 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CPNE3	O75131	537 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ULK1	O75385	1050 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NUDT7	P0C024	238 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	DNAJA1	P31689	397 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TNFSF8	P32971	234 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ACTR1B	P42025	376 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PTGER3	P43115	390 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	GNPDA1	P46926	289 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ACTR1A	P61163	376 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SNRPD2	P62316	118 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	GPLD1	P80108	840 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TGM3	Q08188	693 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	EIF4EBP2	Q13542	120 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	KEAP1	Q14145	624 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	DOC2B	Q14184	412 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SF1	Q15637	639 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	BAK1	Q16611	211 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TST	Q16762	297 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TYSND1	Q2T9J0	566 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SMU1	Q2TAY7	513 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	C9orf64	Q5T6V5	341 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TMEM164	Q5U3C3	297 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	LRRC66	Q68CR7	880 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	HIST2H2AA3	Q6FI13	130 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	OR4F3	Q6IEY1	312 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZNF517	Q6ZMY9	492 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZNF621	Q6ZSS3	439 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PARS2	Q7L3T8	475 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SLC46A3	Q7Z3Q1	461 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SLC9B2	Q86UD5	537 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	IQCH	Q86VS3	1027 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TRIM69	Q86WT6	500 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TMEFF1	Q8IYR6	380 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SLC38A6	Q8IZM9	456 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CBARP	Q8N350	705 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CLDN19	Q8N6F1	224 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SUN5	Q8TC36	379 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	LMX1A	Q8TE12	382 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	WBP2	Q969T9	261 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	HSH2D	Q96JZ2	352 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PPP3R2	Q96LZ3	170 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SLC38A3	Q99624	504 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SH3GL1	Q99961	368 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RIOK2	Q9BVS4	552 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	REEP1	Q9H902	201 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	POPDC3	Q9HBV1	291 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CCNB1IP1	Q9NPC3	277 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RLIM	Q9NVW2	624 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	LHX3	Q9UBR4	397 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	APOBEC3B	Q9UH17	382 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	KLHL20	Q9Y2M5	609 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CCL27	Q9Y4X3	112 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MAU2	Q9Y6X3	613 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	F5	P12259	2224 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	FFAR2	O15552	330 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RGS14	O43566	566 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	KLK8	O60259	260 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ALX3	O95076	343 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	IL6	P05231	212 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	FABP3	P05413	133 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ADRA2A	P08913	450 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	GABRG2	P18507	467 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	FPR1	P21462	350 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	HSD17B2	P37059	387 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PIK3CB	P42338	1070 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	UGT2B15	P54855	530 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CXCR4	P61073	352 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ACVR1	Q04771	509 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MXD1	Q05195	221 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PRKCD	Q05655	676 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ST3GAL4	Q11206	333 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CCIN	Q13939	588 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PROX2	Q3B8N5	592 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MAMSTR	Q6ZN01	415 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NLRP8	Q86W28	1048 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PARG	Q86W56	976 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TEX26	Q8N6G2	289 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	FAM46D	Q8NEK8	389 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CHAC2	Q8WUX2	184 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RLN3	Q8WXF3	142 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MAL2	Q969L2	176 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	EBPL	Q9BY08	206 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	IL1RAP	Q9NPH3	570 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TMEM9B	Q9NQ34	198 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	FTSJ1	Q9UET6	329 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RAPGEFL1	Q9UHV5	662 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ACSL5	Q9ULC5	683 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CARD8	Q9Y2G2	431 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	DYRK1B	Q9Y463	629 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	FAM86C2P	A6NEL3	165 aa		5.41	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RFXANK	O14593	260 aa		5.41	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TAPBP	O15533	448 aa		5.41	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SMAD6	O43541	496 aa	Known RBP	5.41	□□□□□ -1.54

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