RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 PRDM9Q9NQV7 894 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 STX18Q9P2W9 335 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PCDHGB4Q9UN71 923 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PLCL2Q9UPR0 1127 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ERVK-11Q9UQG0 969 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 RP1P56715 2156 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ADAMTS20P59510 1910 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 A0A1W2PR48 441 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 A0A1W2PRB8 838 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 NVLO15381 856 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PDPK1O15530 556 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PROM1O43490 865 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 HYAL3O43820 417 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 B3GALT2O43825 422 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 STAMBPO95630 424 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 GSNP06396 782 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ZNF883P0CG24 379 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 HTR1EP28566 365 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 MSX2P35548 267 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ALDH9A1P49189 494 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ATXN3P54252 364 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PCBP4P57723 403 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 AP2B1P63010 937 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 SIM1P81133 766 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 DEFB110Q30KQ9 67 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 AMZ1Q400G9 498 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 DEFB134Q4QY38 66 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ZNF621Q6ZSS3 439 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 KMT5CQ86Y97 462 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ARHGEF39Q8N4T4 335 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 EID2Q8N6I1 236 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ECSITQ9BQ95 431 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 THUMPD3Q9BV44 507 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PCDHAC1Q9H158 963 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 IKZF5Q9H5V7 419 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 KAT8Q9H7Z6 458 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 LYRM4Q9HD34 91 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ENAMQ9NRM1 1142 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 SOHLH2Q9NX45 425 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 GMPR2Q9P2T1 348 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PHF11Q9UIL8 331 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 FBXW2Q9UKT8 454 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 VPS4AQ9UN37 437 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 MRPS2Q9Y399 296 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ATG4BQ9Y4P1 393 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 UNC13CQ8NB66 2214 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 ITPR1Q14643 2758 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 EVPLLA8MZ36 301 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 TOX3O15405 576 aaPredicted RBP13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 GALR3O60755 368 aaPredicted RBP13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 AIFM1O95831 613 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 C6orf47O95873 294 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 PPIBP23284 216 aaKnown RBP13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 SNRPNP63162 240 aaKnown RBP13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 HBA1P69905 142 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 TNFRSF17Q02223 184 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 MLC1Q15049 377 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 TCTE1Q5JU00 501 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 NIPAL1Q6NVV3 410 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 GUSBP11Q6P575 273 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 GPR155Q7Z3F1 870 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 DHFR2Q86XF0 187 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 CALHM3Q86XJ0 350 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 TRIML2Q8N7C3 387 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 KDF1Q8NAX2 398 aaPredicted RBP13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 BHLHE22Q8NFJ8 381 aaPredicted RBP13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 TNIP2Q8NFZ5 429 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 KLHL6Q8WZ60 621 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 OR5P2Q8WZ92 322 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 EXOSC8Q96B26 276 aaKnown RBP13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 ZNF583Q96ND8 569 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 MAPKAP1Q9BPZ7 522 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 NPLQ9BXD5 320 aaPredicted RBP13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 NEUROD4Q9HD90 331 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 ACSS1Q9NUB1 689 aaPredicted RBP13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 MS4A12Q9NXJ0 267 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 TAS2R9Q9NYW1 312 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 ACTR3BQ9P1U1 418 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 KLHL3Q9UH77 587 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 UTS2RQ9UKP6 389 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 KLK13Q9UKR3 277 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 DAPP1Q9UN19 280 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 CORO2BQ9UQ03 480 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 PCDHB3Q9Y5E6 796 aa13.47□□□□□ -0.25
CYB561A3-216ENST00000540755 CPED1A4D0V7 1026 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 FAM220BPB1ANY3 271 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 CLIC1O00299 241 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 KRT36O76013 467 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 NR2F6P10588 404 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 CKMT1AP12532 417 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 GPX2P18283 190 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 EFNA1P20827 205 aaPredicted RBP13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 BUD31P41223 144 aaPredicted RBP13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 GZMMP51124 257 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 EMP3P54852 163 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 LIM2P55344 173 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 HSD11B2P80365 405 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 SLC34A1Q06495 639 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 ABHD18Q0P651 414 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 GAB1Q13480 694 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms