RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SLC6A14Q9UN76 642 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 A0A0G2JPF8 293 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 LCHNA4D1U4 455 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 POM121CA8CG34 1229 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 EFCAB7A8K855 629 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 HNRNPCL3B7ZW38 293 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 LGI1O95970 557 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF806P0C7X5 589 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 HNRNPCL4P0DMR1 293 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ERCC2P18074 760 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 TYMPP19971 482 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 NOS2P35228 1153 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 SOX3P41225 446 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 CRYBB2P43320 205 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 NFKB2Q00653 900 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 LRRC32Q14392 662 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 GOLGA7BQ2TAP0 167 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF789Q5FWF6 425 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ESRP1Q6NXG1 681 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 BEND4Q6ZU67 534 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 PAQR9Q6ZVX9 377 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 RAB11FIP2Q7L804 512 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ISCA2Q86U28 154 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ADGRF3Q8IZF5 1079 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ARL6IP6Q8N6S5 226 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 C2CD4AQ8NCU7 369 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 EDARADDQ8WWZ3 215 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 LRRC46Q96FV0 321 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 PCED1BQ96HM7 432 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF285Q96NJ3 590 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 KCNJ15Q99712 375 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 TREX2Q9BQ50 279 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ACBD6Q9BR61 282 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 PPP1R3EQ9H7J1 279 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 NIT2Q9NQR4 276 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 GPN3Q9UHW5 284 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 C7orf66A4D0T2 115 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ERI2A8K979 691 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 CRCPO75575 148 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 RGS11O94810 467 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 RLN2P04090 185 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 OR4Q2P0C623 313 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 SMIM6P0DI80 62 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 CTPS1P17812 591 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 IL1RNP18510 177 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 RHCEP18577 417 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 RAB3BP20337 219 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 PCSK1P29120 753 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 GGT2P36268 569 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 INPP1P49441 399 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ATP12AP54707 1039 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 DCDC1P59894 354 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 RPS7P62081 194 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 DMC1Q14565 340 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 TEAD4Q15561 434 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 PFKFB4Q16877 469 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 PKDCCQ504Y2 493 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF628Q5EBL2 1059 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 C9orf50Q5SZB4 431 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 SUSD1Q6UWL2 747 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 HSDL2Q6YN16 418 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 C3P1Q6ZMU1 363 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 MACC1Q6ZN28 852 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 GDPGP1Q6ZNW5 385 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF605Q86T29 641 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 STX12Q86Y82 276 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ADGRG2Q8IZP9 1017 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 THEM5Q8N1Q8 247 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 OR1M1Q8NGA1 313 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 OR2T11Q8NH01 316 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 IGSF21Q96ID5 467 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 H2AFJQ9BTM1 129 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 MED18Q9BUE0 208 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 PRR14Q9BWN1 585 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 PAPOLGQ9BWT3 736 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 CDCA4Q9BXL8 241 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF275Q9NSD4 429 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 PHF11Q9UIL8 331 aa9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 SAMHD1Q9Y3Z3 626 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-243ENST00000540387 BEST1O76090 585 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ATG12O94817 140 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 AP2A2O94973 939 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 OAZ2O95190 189 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SYPP08247 313 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ITGB7P26010 798 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 CAPZA1P52907 286 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 RABGGTBP53611 331 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 HTRA4P83105 476 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 DEFA5Q01523 94 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SERTAD2Q14140 314 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 OPCMLQ14982 345 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 CCDC85BQ15834 202 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 INO80DQ53TQ3 878 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 FAHD1Q6P587 224 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 HSD17B13Q7Z5P4 300 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 B3GNT7Q8NFL0 401 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC35F5Q8WV83 523 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 TRMT2BQ96GJ1 504 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SFXN2Q96NB2 322 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ERMAPQ96PL5 475 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms