RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 TNFRSF17Q02223 184 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 LRRC74AQ0VAA2 488 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 RCN1Q15293 331 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 PRAMEF17Q5VTA0 474 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 SLC48A1Q6P1K1 146 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 TMEM71Q6P5X7 295 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 SPATA24Q86W54 205 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 CARFQ8N187 725 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 CA13Q8N1Q1 262 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 D2HGDHQ8N465 521 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 RCBTB1Q8NDN9 531 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 PYDC1Q8WXC3 89 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 ATOH1Q92858 354 aaPredicted RBP6.52□□□□□ -1.37
CDH19-203ENST00000540086 FAM120BQ96EK7 910 aaKnown RBP6.52□□□□□ -1.37
CDH19-203ENST00000540086 RNF31Q96EP0 1072 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 ZNF764Q96H86 408 aaPredicted RBP6.52□□□□□ -1.37
CDH19-203ENST00000540086 SLC41A2Q96JW4 573 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 ZNF285Q96NJ3 590 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 BBS4Q96RK4 519 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 SH3GL1Q99961 368 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 RBCK1Q9BYM8 510 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 TRIM4Q9C037 500 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 CHRNA10Q9GZZ6 450 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 LRRN3Q9H3W5 708 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 CXorf36Q9H7Y0 433 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 KAT8Q9H7Z6 458 aaKnown RBP6.52□□□□□ -1.37
CDH19-203ENST00000540086 TPT1P8Q9HAU6 139 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 SLC35C2Q9NQQ7 365 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 TAS2R9Q9NYW1 312 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 EHD3Q9NZN3 535 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 SEMA5BQ9P283 1151 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 PHF11Q9UIL8 331 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 CES1P1Q9UKY3 287 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 DAPP1Q9UN19 280 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 SNX8Q9Y5X2 465 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 SNRNP200O75643 2136 aaKnown RBP6.52□□□□□ -1.37
CDH19-203ENST00000540086 HEATR5BQ9P2D3 2071 aa6.52□□□□□ -1.37
CDH19-203ENST00000540086 ARID1BQ8NFD5 2236 aaPredicted RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 EVPLLA8MZ36 301 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 FAM227AF5H4B4 570 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 TXNDC9O14530 226 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 FOXS1O43638 330 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 OR2B3O76000 313 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 RETP07949 1114 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 ZCCHC18P0CG32 403 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 DDX5P17844 614 aaKnown RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 NTSP30990 170 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 BUD31P41223 144 aaPredicted RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 GRK6P43250 576 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 CDK9P50750 372 aaKnown RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 NCBP2P52298 156 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDH19-203ENST00000540086 MRPS22P82650 360 aaKnown RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 MAT1AQ00266 395 aaKnown RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 ID2Q02363 134 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 DUSP2Q05923 314 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 TRAP1Q12931 704 aaKnown RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 BNIP2Q12982 314 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 SQSTM1Q13501 440 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 NDUFA9Q16795 377 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 SPATS1Q496A3 300 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 TCTE1Q5JU00 501 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDH19-203ENST00000540086 ANGPTL8Q6UXH0 198 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 DHFR2Q86XF0 187 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 SPPL2CQ8IUH8 684 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 OR4N5Q8IXE1 308 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 TMEM52Q8NDY8 209 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 OR2T12Q8NG77 320 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 OR1L3Q8NH93 324 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 GOT1L1Q8NHS2 421 aaPredicted RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 ZFP90Q8TF47 636 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 OR5P2Q8WZ92 322 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 CNRIP1Q96F85 164 aaPredicted RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 ZBED6CLQ96FA7 236 aaPredicted RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 CNDP2Q96KP4 475 aaKnown RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 CCDC74BQ96LY2 380 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 AMDHD1Q96NU7 426 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 PHF12Q96QT6 1004 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 DPH2Q9BQC3 489 aaPredicted RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 SLC35A5Q9BS91 424 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 GLIPR2Q9H4G4 154 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 ZNF768Q9H5H4 540 aaKnown RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 RNPEPL1Q9HAU8 725 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 LYRM4Q9HD34 91 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 RXFP3Q9NSD7 469 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 DNAAF2Q9NVR5 837 aaKnown RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 TAS2R7Q9NYW3 318 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 HCN3Q9P1Z3 774 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 ZNF282Q9UDV7 671 aaPredicted RBP6.51□□□□□ -1.37
CDH19-203ENST00000540086 CLCA2Q9UQC9 943 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 ENTPD4Q9Y227 616 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 SNX13Q9Y5W8 968 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 PCDH15Q96QU1 1955 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 IGHV5-10-1A0A0J9YXX1 117 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 RNF103-CHMP3A0A140T963 221 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 MYOCOSA0A1B0GUC4 107 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 FITM1A5D6W6 292 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 MYO1GB0I1T2 1018 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 CHST10O43529 356 aa6.51□□□□□ -1.37
CDH19-203ENST00000540086 STAMBPO95630 424 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms