RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 TRHRP34981 398 aaPredicted RBP13.93□□□□□ -0.18
RAB40B-202ENST00000538809 ARL1P40616 181 aaPredicted RBP13.93□□□□□ -0.18
RAB40B-202ENST00000538809 RFC3P40938 356 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 PIK3CBP42338 1070 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 CA7P43166 264 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 PIK3CGP48736 1102 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 GPR143P51810 404 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 RPS13P62277 151 aaKnown RBP13.93□□□□□ -0.18
RAB40B-202ENST00000538809 HSF1Q00613 529 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 RBPJQ06330 500 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 STX4Q12846 297 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 TSNAXIP1Q2TAA8 658 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 RNFT1Q5M7Z0 435 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 DEPDC1Q5TB30 811 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 TIFABQ6ZNK6 161 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 CHSY3Q70JA7 882 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 SIAH3Q8IW03 269 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 CYP4Z2PQ8N1L4 340 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 TMEM132CQ8N3T6 1108 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 TMEM156Q8N614 296 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 PTGR2Q8N8N7 351 aaPredicted RBP13.93□□□□□ -0.18
RAB40B-202ENST00000538809 WDR20Q8TBZ3 569 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 TMEM125Q96AQ2 219 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 CCDC120Q96HB5 630 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 MAGED4Q96JG8 741 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 RHOXF2Q9BQY4 288 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 OR8D2Q9GZM6 311 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 TRIM45Q9H8W5 580 aaPredicted RBP13.93□□□□□ -0.18
RAB40B-202ENST00000538809 ZBTB26Q9HCK0 441 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 ADGRE2Q9UHX3 823 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 TINAGQ9UJW2 476 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 TNPO3Q9Y5L0 923 aaKnown RBP13.93□□□□□ -0.18
RAB40B-202ENST00000538809 CLCA3PQ9Y6N3 262 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 SPACA6W5XKT8 324 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 NINQ8N4C6 2090 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 CELSR2Q9HCU4 2923 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 TEX15Q9BXT5 2789 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 PHF3Q92576 2039 aaKnown RBP13.92□□□□□ -0.18
RAB40B-202ENST00000538809 OR7A17O14581 309 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 FGF17O60258 216 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 SLC19A2O60779 497 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 SNRPAP09012 282 aaKnown RBP13.92□□□□□ -0.18
RAB40B-202ENST00000538809 MEOX1P50221 254 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 HNRNPH2P55795 449 aaKnown RBP13.92□□□□□ -0.18
RAB40B-202ENST00000538809 GPR85P60893 370 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 SLAMF1Q13291 335 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 C3AR1Q16581 482 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 CPSF6Q16630 551 aaKnown RBP eCLIP13.92□□□□□ -0.18
RAB40B-202ENST00000538809 OR4C11Q6IEV9 310 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 OR4N5Q8IXE1 308 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 PTPMT1Q8WUK0 201 aaPredicted RBP13.92□□□□□ -0.18
RAB40B-202ENST00000538809 RGMAQ96B86 450 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 ANKRD9Q96BM1 317 aaPredicted RBP13.92□□□□□ -0.18
RAB40B-202ENST00000538809 PHF21BQ96EK2 531 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 SCYL1Q96KG9 808 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 CDK15Q96Q40 435 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 ZNF717Q9BY31 904 aaPredicted RBP13.92□□□□□ -0.18
RAB40B-202ENST00000538809 IPPKQ9H8X2 491 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 SUCOQ9UBS9 1254 aaKnown RBP13.92□□□□□ -0.18
RAB40B-202ENST00000538809 FETUBQ9UGM5 382 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 PCTPQ9UKL6 214 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 TMCO1Q9UM00 188 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 KLF13Q9Y2Y9 288 aaPredicted RBP13.92□□□□□ -0.18
RAB40B-202ENST00000538809 RNF11Q9Y3C5 154 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 PCDHGA11Q9Y5H2 935 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 ITPR2Q14571 2701 aa13.92□□□□□ -0.18
RAB40B-202ENST00000538809 TMEM200CA6NKL6 621 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 C17orf105B2RV13 164 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 WWP2O00308 870 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 CDK2AP1O14519 115 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 OR2J2O76002 312 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 ZFAND5O76080 213 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 ETHE1O95571 254 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 MLYCDO95822 493 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 RPS17P08708 135 aaKnown RBP13.91□□□□□ -0.18
RAB40B-202ENST00000538809 TNNI3P19429 210 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 SSR4P51571 173 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 ARFIP1P53367 373 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 PHEXP78562 749 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 TNFRSF17Q02223 184 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 TRAF3Q13114 568 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 C18orf63Q68DL7 685 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 MDGA2Q7Z553 956 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 SULF2Q8IWU5 870 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 GSPT2Q8IYD1 628 aaKnown RBP13.91□□□□□ -0.18
RAB40B-202ENST00000538809 EIF1ADQ8N9N8 165 aaKnown RBP13.91□□□□□ -0.18
RAB40B-202ENST00000538809 OR52B6Q8NGF0 335 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 OR14A16Q8NHC5 309 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 SLC2A12Q8TD20 617 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 MZB1Q8WU39 189 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 ITLN2Q8WWU7 325 aaPredicted RBP13.91□□□□□ -0.18
RAB40B-202ENST00000538809 DAZLQ92904 295 aaKnown RBP13.91□□□□□ -0.18
RAB40B-202ENST00000538809 NSUN5Q96P11 429 aaKnown RBP13.91□□□□□ -0.18
RAB40B-202ENST00000538809 MRPL57Q9BQC6 102 aaKnown RBP13.91□□□□□ -0.18
RAB40B-202ENST00000538809 NTMT1Q9BV86 223 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 C1QTNF3Q9BXJ4 246 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 MRPL46Q9H2W6 279 aaKnown RBP13.91□□□□□ -0.18
RAB40B-202ENST00000538809 NOL11Q9H8H0 719 aaKnown RBP13.91□□□□□ -0.18
RAB40B-202ENST00000538809 PSD3Q9NYI0 1048 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 VTI1BQ9UEU0 232 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms