RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MVB12AQ96EY5 273 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SMIM10Q96HG1 83 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SLC45A3Q96JT2 553 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 GBP5Q96PP8 586 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RAB3IPQ96QF0 476 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TAAR9Q96RI9 348 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SYNPO2LQ9H987 977 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 FBXO8Q9NRD0 319 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 FAM120CQ9NX05 1096 aaKnown RBP10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TEX10Q9NXF1 929 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ATP6V1HQ9UI12 483 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CROTQ9UKG9 612 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 DAPP1Q9UN19 280 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 VPS4AQ9UN37 437 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 L3MBTL1Q9Y468 752 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ATG4BQ9Y4P1 393 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ASB4Q9Y574 426 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SNX8Q9Y5X2 465 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ASXL3Q9C0F0 2248 aa10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RIF1Q5UIP0 2472 aaKnown RBP10.08□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PRSS51A0A1B0GVH4 220 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 A0A1W2PR48 441 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 BLACEA4D250 179 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 FITM1A5D6W6 292 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 EVPLLA8MZ36 301 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 B4E171 279 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C9J4A7 227 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 DYRK3O43781 588 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 OR10H2O60403 315 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CPNE3O75131 537 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 BMP10O95393 424 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 AIFM1O95831 613 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TBX6O95947 436 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 IFNA16P05015 189 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MSL3P1P0C860 447 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CCL4P13236 92 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CSNK2A2P19784 350 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 EFNA1P20827 205 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PTPN4P29074 926 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 IL12AP29459 219 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RBMS1P29558 406 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MPIP34949 423 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CHI3L1P36222 383 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TSPAN7P41732 249 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 XCR1P46094 333 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 NCBP2P52298 156 aaKnown RBP eCLIP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 DCDP81605 110 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MAT1AQ00266 395 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TNFRSF17Q02223 184 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 EIF3IQ13347 325 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MINDY4Q4G0A6 757 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C3orf38Q5JPI3 329 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PRAMEF17Q5VTA0 474 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MLIPQ5VWP3 458 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PWWP2BQ6NUJ5 590 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RINLQ6ZS11 566 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PRSS41Q7RTY9 318 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 YTHDF3Q7Z739 585 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 DHDDSQ86SQ9 333 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SLCO6A1Q86UG4 719 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ANKRD46Q86W74 232 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 FUNDC1Q8IVP5 155 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PRSS58Q8IYP2 241 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 GALNT15Q8N3T1 639 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 OR51Q1Q8NH59 317 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 DNAJB8Q8NHS0 232 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 WDR36Q8NI36 951 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MR1Q95460 341 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ROPN1LQ96C74 230 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ZBED6CLQ96FA7 236 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TEX37Q96LM6 180 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C10orf90Q96M02 699 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ZNF285Q96NJ3 590 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SH3GL1Q99961 368 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ZPBPQ9BS86 351 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 BTBD10Q9BSF8 475 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RBCK1Q9BYM8 510 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ASPSCR1Q9BZE9 553 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ULBP3Q9BZM4 244 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 BHLHE41Q9C0J9 482 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 AICDAQ9GZX7 198 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 LHX9Q9NQ69 397 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PRTFDC1Q9NRG1 225 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SEMA3GQ9NS98 782 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 IFT80Q9P2H3 777 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CROCCQ5TZA2 2017 aa10.07□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C4orf51C9J302 202 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C3orf80F5H4A9 247 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 FAM227AF5H4B4 570 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 H0YHG0 523 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ANKRD28O15084 1053 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PGRMC2O15173 223 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 FOXS1O43638 330 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 GMNNO75496 209 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CDC123O75794 336 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CIB2O75838 187 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SCELO95171 688 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C8orf89P0DMQ9 161 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 FGF5P12034 268 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms