RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 ASMTP46597 345 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 PDE7AQ13946 482 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 GPR65Q8IYL9 337 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 TCEANCQ8N8B7 351 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 SPATA9Q9BWV2 254 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 BHLHE41Q9C0J9 482 aaPredicted RBP13.41□□□□□ -0.26
CLPB-209ENST00000538039 TMEM38AQ9H6F2 299 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 ASAH2Q9NR71 780 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 NUFIP1Q9UHK0 495 aaKnown RBP13.41□□□□□ -0.26
CLPB-209ENST00000538039 MEIOCA2RUB1 952 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 PRKYO43930 277 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 LEFTY1O75610 366 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 ETV5P41161 510 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 CCR2P41597 374 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 ETV1P50549 477 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 CDC42P60953 191 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 PSPHP78330 225 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 GRIN2CQ14957 1233 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 TBRG1Q3YBR2 411 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 HENMT1Q5T8I9 393 aaKnown RBP13.41□□□□□ -0.26
CLPB-209ENST00000538039 LYPD8Q6UX82 237 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 HTR3DQ70Z44 454 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 GEMIN6Q8WXD5 167 aaKnown RBP13.41□□□□□ -0.26
CLPB-209ENST00000538039 PRR14Q9BWN1 585 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 NDEL1Q9GZM8 345 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 ZNF556Q9HAH1 456 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 DDX28Q9NUL7 540 aaKnown RBP13.41□□□□□ -0.26
CLPB-209ENST00000538039 CFL2Q9Y281 166 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 TLR4O00206 839 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 MYCP01106 439 aaPredicted RBP13.41□□□□□ -0.26
CLPB-209ENST00000538039 BCHEP06276 602 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 ARAFP10398 606 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 SOX6P35712 828 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 MAPK8P45983 427 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 PTPN5P54829 565 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 INSL4Q14641 139 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 SPHARQ15513 63 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 SPIN4Q56A73 249 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 SNAP47Q5SQN1 464 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 ZNF517Q6ZMY9 492 aaPredicted RBP13.41□□□□□ -0.26
CLPB-209ENST00000538039 PPCDCQ96CD2 204 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 CEP19Q96LK0 163 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 SLC46A2Q9BY10 475 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 SERHL2Q9H4I8 314 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 DMRT3Q9NQL9 472 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 PLEKHB1Q9UF11 243 aaPredicted RBP13.41□□□□□ -0.26
CLPB-209ENST00000538039 KCND3Q9UK17 655 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 TRAPPC4Q9Y296 219 aa13.41□□□□□ -0.26
CLPB-209ENST00000538039 A0A075B6Q4 140 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 ELAVL4P26378 380 aaKnown RBP13.4□□□□□ -0.26
CLPB-209ENST00000538039 ZNF91Q05481 1191 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 PIN1Q13526 163 aaPredicted RBP13.4□□□□□ -0.26
CLPB-209ENST00000538039 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.4□□□□□ -0.26
CLPB-209ENST00000538039 ZNF658BQ4V348 819 aaPredicted RBP13.4□□□□□ -0.26
CLPB-209ENST00000538039 ARSIQ5FYB1 569 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 OR2G6Q5TZ20 316 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 THOC7Q6I9Y2 204 aaKnown RBP13.4□□□□□ -0.26
CLPB-209ENST00000538039 MED27Q6P2C8 311 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 TMEM220Q6QAJ8 160 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 PAMR1Q6UXH9 720 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 TRIM48Q8IWZ4 208 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 PHC2Q8IXK0 858 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 BMPERQ8N8U9 685 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 TM9SF4Q92544 642 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 TMEM169Q96HH4 297 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 C11orf54Q9H0W9 315 aaPredicted RBP13.4□□□□□ -0.26
CLPB-209ENST00000538039 CTPS2Q9NRF8 586 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 CLN6Q9NWW5 311 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 PAQR5Q9NXK6 330 aaPredicted RBP13.4□□□□□ -0.26
CLPB-209ENST00000538039 TMEM98Q9Y2Y6 226 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 HCFC2Q9Y5Z7 792 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 SZT2Q5T011 3432 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 SPEGQ15772 3267 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 LRRK1Q38SD2 2015 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 A0A1W2PRB8 838 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 PIPSLA2A3N6 862 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 EFCAB10A6NFE3 127 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 LEFTY2O00292 366 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 PLA2G10O15496 165 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 CDRT1O95170 752 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 C1orf105O95561 183 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 LATS1O95835 1130 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 URODP06132 367 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 CSF3P09919 207 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 TIMP2P16035 220 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 FCHO2Q0JRZ9 810 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 LRRC74AQ0VAA2 488 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 GLYR1Q49A26 553 aaPredicted RBP13.4□□□□□ -0.26
CLPB-209ENST00000538039 C22orf42Q6IC83 251 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 GDPD4Q6W3E5 623 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 CCDC149Q6ZUS6 474 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 SLC7A13Q8TCU3 470 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 PIK3R3Q92569 461 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 ACAT2Q9BWD1 397 aa13.4□□□□□ -0.26
CLPB-209ENST00000538039 PLK4O00444 970 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 KRT8P05787 483 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 RHCEP18577 417 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 TNNI3P19429 210 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 DAB2P98082 770 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 E2F2Q14209 437 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms