RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 DIP2AQ14689 1571 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 MITFO75030 526 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 MRPL3P09001 348 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 GM2AP17900 193 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 ETV4P43268 484 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SPHARQ15513 63 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 RAB30Q15771 203 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 MEDAGQ5VYS4 303 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 ZER1Q7Z7L7 766 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 UTP4Q969X6 686 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 C5orf34Q96MH7 638 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 CDK15Q96Q40 435 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 OSER1Q9NX31 292 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SCML2Q9UQR0 700 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 TYROBPO43914 113 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 TBL1XO60907 577 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SORBS2O94875 1100 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 AMY2AP04746 511 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 RFC2P35250 354 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SMUG1Q53HV7 270 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 C4orf32Q8N8J7 132 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 ZDHHC12Q96GR4 267 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 FAM83CQ9BQN1 747 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 FBXL21Q9UKT6 434 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 COL3A1P02461 1466 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 NPIPA7E9PJI5 369 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 NPIPA8P0DM63 369 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 INSRRP14616 1297 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 TAS2R43P59537 309 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 RNF4P78317 190 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 DRICH1Q6PGQ1 229 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 ZNF34Q8IZ26 560 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 AKR7LQ8NHP1 331 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 C1QTNF7Q9BXJ2 289 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 OR51I1Q9H343 314 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 VRTNQ9H8Y1 702 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 EMC7Q9NPA0 242 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 DOCK2Q92608 1830 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 LOC105369274A0A096LPK9 316 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 PIP5K1CO60331 668 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 JUNP05412 331 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 HCKP08631 526 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SPATA31C1P0DKV0 1188 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 HTR7P34969 479 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 DSC2Q02487 901 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 NPRL3Q12980 569 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SMIM15Q7Z3B0 74 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 KLBQ86Z14 1044 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 OR4N4Q8N0Y3 316 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 IQCF1Q8N6M8 205 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 ZNF454Q8N9F8 522 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SUCNR1Q9BXA5 334 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 TLE6Q9H808 572 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 TECTAO75443 2155 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 TO15178 435 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 HNF1BP35680 557 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 TNFSF9P41273 254 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 RPS5P46782 204 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SLC6A9P48067 706 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 OR4D2P58180 307 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SLC26A5P58743 744 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 GTF2BQ00403 316 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 MGAT3Q09327 533 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 HNRNPDQ14103 355 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 ATXN7L2Q5T6C5 722 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 UNC93AQ86WB7 457 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 KRTCAP2Q8N6L1 136 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 OR5T2Q8NGG2 359 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 BRSK1Q8TDC3 778 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 STYXQ8WUJ0 223 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 RBPMSQ93062 196 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 B3GNT5Q9BYG0 378 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 POTEKPQ9BYX7 375 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 PDGFDQ9GZP0 370 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 FAM86C1Q9NVL1 165 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 NOCTQ9UK39 431 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 J3KR12 359 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 GKN3PP0CG01 181 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 DLX5P56178 289 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 RAB8AP61006 207 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 SNRPD1P62314 119 aaKnown RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 CRYZQ08257 329 aaKnown RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 TMEM86AQ8N2M4 240 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 SMAP2Q8WU79 429 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 SLC25A51Q9H1U9 297 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 CALML5Q9NZT1 146 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 EFCAB7A8K855 629 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 KHNYNO15037 678 aaKnown RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 NKRFO15226 690 aaKnown RBP eCLIP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 PRKYO43930 277 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 NIPSNAP2O75323 286 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 MT-CYBP00156 380 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 IGFALSP35858 605 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 ACVR1BP36896 505 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 ETV5P41161 510 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 DNAJB13P59910 316 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 MED27Q6P2C8 311 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 SSX7Q7RTT5 188 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 TMPRSS12Q86WS5 348 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 HAPLN3Q96S86 360 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms