RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 EBLN1P0CF75 366 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 CD22P20273 847 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 VBP1P61758 197 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 ILF2Q12905 390 aaKnown RBP7.86□□□□□ -1.15
ABCA4-207ENST00000536513 NNATQ16517 81 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 SYT16Q17RD7 645 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 ZNF750Q32MQ0 723 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 UGT3A2Q3SY77 523 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 ATAD3BQ5T9A4 648 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 CPTPQ5TA50 214 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 KRT78Q8N1N4 520 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 PDPRQ8NCN5 879 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 OR52J3Q8NH60 311 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 SPPL2AQ8TCT8 520 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 PROKR1Q8TCW9 393 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 MSLNLQ96KJ4 702 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 MUS81Q96NY9 551 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 BBS4Q96RK4 519 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 SERINC2Q96SA4 455 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 AIF1LQ9BQI0 150 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 TMEM246Q9BRR3 403 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 BEX2Q9BXY8 128 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 LEF1Q9UJU2 399 aaPredicted RBP7.86□□□□□ -1.15
ABCA4-207ENST00000536513 MRPS17Q9Y2R5 130 aaKnown RBP7.86□□□□□ -1.15
ABCA4-207ENST00000536513 PIPSLA2A3N6 862 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 ICMTO60725 284 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 NPPBP16860 134 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 TNFRSF1BP20333 461 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 PRKACBP22694 351 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 SUOXP51687 545 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 MANFP55145 182 aaKnown RBP7.86□□□□□ -1.15
ABCA4-207ENST00000536513 BTN3A2P78410 334 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 MTAPQ13126 283 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 PWP1Q13610 501 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 SHISA6Q6ZSJ9 500 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 ZNF551Q7Z340 670 aaPredicted RBP7.86□□□□□ -1.15
ABCA4-207ENST00000536513 AMER2Q8N7J2 671 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 OR4A15Q8NGL6 344 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 OR2L2Q8NH16 312 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 XAGE5Q8WWM1 108 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 CAMK1GQ96NX5 476 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 TGM7Q96PF1 710 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 NEURL2Q9BR09 285 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 USE1Q9NZ43 259 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 SIT1Q9Y3P8 196 aa7.86□□□□□ -1.15
ABCA4-207ENST00000536513 A8MUA0 341 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 hCG_2039718K7EN88 272 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 GTF2E2P29084 291 aaKnown RBP7.85□□□□□ -1.15
ABCA4-207ENST00000536513 GAS6Q14393 721 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 HERC3Q15034 1050 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 FAM214AQ32MH5 1076 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.85□□□□□ -1.15
ABCA4-207ENST00000536513 P2RY8Q86VZ1 359 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 GALNT12Q8IXK2 581 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 KLHDC8BQ8IXV7 354 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 ZNF420Q8TAQ5 688 aaPredicted RBP7.85□□□□□ -1.15
ABCA4-207ENST00000536513 PPCDCQ96CD2 204 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 C8orf33Q9H7E9 229 aaPredicted RBP7.85□□□□□ -1.15
ABCA4-207ENST00000536513 C12orf4Q9NQ89 552 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 OLAHQ9NV23 265 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 ADPRHL2Q9NX46 363 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 VAPAQ9P0L0 249 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 MMP17Q9ULZ9 603 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 TPRKBQ9Y3C4 175 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 BOLA1Q9Y3E2 137 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 CORINQ9Y5Q5 1042 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 DMDP11532 3685 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 PTPRSQ13332 1948 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 A0A0B4J203 849 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 SLC5A10A0PJK1 596 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 VEGFDO43915 354 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 CPNE3O75131 537 aaKnown RBP7.85□□□□□ -1.15
ABCA4-207ENST00000536513 IL3P08700 152 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 THRBP10828 461 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 PTGS2P35354 604 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 HNMTP50135 292 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 OR4D2P58180 307 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 VSX2P58304 361 aaPredicted RBP7.85□□□□□ -1.15
ABCA4-207ENST00000536513 FOXM1Q08050 763 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 ERV3-1Q14264 604 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 SLC14A2Q15849 920 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 MINDY4Q4G0A6 757 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 PIGGQ5H8A4 983 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 GLYATQ6IB77 296 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 FIP1L1Q6UN15 594 aaKnown RBP7.85□□□□□ -1.15
ABCA4-207ENST00000536513 UCN3Q969E3 161 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 ZNF717Q9BY31 904 aaPredicted RBP7.85□□□□□ -1.15
ABCA4-207ENST00000536513 HDAC8Q9BY41 377 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 NANOGQ9H9S0 305 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 ZIM2Q9NZV7 527 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 NOX1Q9Y5S8 564 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 MAU2Q9Y6X3 613 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 COL4A3Q01955 1670 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 LOC110117498-PIK3R3F6TDL0 507 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 NME4O00746 187 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 PRKD3O94806 890 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 AP2A2O94973 939 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 C6orf47O95873 294 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 C1GALT1C1LP0DN25 315 aa7.85□□□□□ -1.15
ABCA4-207ENST00000536513 CBSLP0DN79 551 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms