RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 DLEU7Q6UYE1 221 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 DBX2Q6ZNG2 339 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TMEM91Q6ZNR0 172 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 RRM2BQ7LG56 351 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 GPR142Q7Z601 462 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 VTCN1Q7Z7D3 282 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PDZD3Q86UT5 571 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PIM3Q86V86 326 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SERINC5Q86VE9 423 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 LDLRAD3Q86YD5 345 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 CHPFQ8IZ52 775 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 STX19Q8N4C7 294 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 C12orf45Q8N5I9 185 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 NANOGP1Q8N7R0 232 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZFP41Q8N8Y5 198 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 IL17RCQ8NAC3 791 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 BVESQ8NE79 360 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 OR9Q1Q8NGQ5 310 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 OR2T35Q8NGX2 323 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SETD6Q8TBK2 473 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 RXFP4Q8TDU9 374 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 AP2M1Q96CW1 435 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 MARS2Q96GW9 593 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 C14orf144Q96I85 54 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 QKIQ96PU8 341 aaKnown RBP eCLIP3.56□□□□□ -1.84
MCF2-210ENST00000536274 MNTQ99583 582 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZNF251Q9BRH9 671 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 CPEB1Q9BZB8 566 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 SMOC1Q9H4F8 434 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ANKRD19PQ9H560 264 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 METTL17Q9H7H0 456 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 MID1IP1Q9NPA3 183 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SLC52A3Q9NQ40 469 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 MRPL15Q9P015 296 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 DNAJB9Q9UBS3 223 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 LAMP5Q9UJQ1 280 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PURGQ9UJV8 347 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 COQ4Q9Y3A0 265 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 Q9Y3F1 56 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ORC6Q9Y5N6 252 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 GPR45Q9Y5Y3 372 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZNF638Q14966 1978 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 URADA6NGE7 173 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ANKDD1BA6NHY2 528 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 A8MXK9 166 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 G3V3Q6 166 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 FOXE1O00358 373 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 NARSO43776 548 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 B4GALT3O60512 393 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 FAM157BP0CG42 384 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 CBSLP0DN79 551 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TFPIP10646 304 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ENGP17813 658 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PVALBP20472 110 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 CYP2F1P24903 491 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 GJA4P35212 333 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 CBSP35520 551 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SPAM1P38567 509 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ETV6P41212 452 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 MAGEA12P43365 314 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PGDP52209 483 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 CLDN20P56880 219 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ACTR1AP61163 376 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TSPAN5P62079 268 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 DEFA6Q01524 100 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 MBTD1Q05BQ5 628 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 CAMK2DQ13557 499 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 OPCMLQ14982 345 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 COL28A1Q2UY09 1125 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 XKR9Q5GH70 373 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 NCMAPQ5T1S8 102 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 LIPKQ5VXJ0 399 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 STEAP4Q687X5 459 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PDE12Q6L8Q7 609 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 MRPL14Q6P1L8 145 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 XRRA1Q6P2D8 792 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 NOTUMQ6P988 496 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 CNIH2Q6PI25 160 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 XKRXQ6PP77 449 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 OVCH2Q7RTZ1 564 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZER1Q7Z7L7 766 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 MCATQ8IVS2 390 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 KLHL36Q8N4N3 616 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ARRDC1Q8N5I2 433 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 AVL9Q8NBF6 648 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 KCT2Q8NC54 265 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PLA2G15Q8NCC3 412 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 BPIFCQ8NFQ6 507 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 OR10H5Q8NGA6 315 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 OR52K2Q8NGK3 314 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 OR52J3Q8NH60 311 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZDHHC1Q8WTX9 485 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TWIST2Q8WVJ9 160 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ISL2Q96A47 359 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 NXPE2Q96DL1 559 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 MISP3Q96FF7 219 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ELMOD3Q96FG2 381 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 EXOC2Q96KP1 924 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 RPRD1AQ96P16 312 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 MGLLQ99685 303 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms