RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TUBA8Q9NY65 449 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 VTI1BQ9UEU0 232 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PPP2R2CQ9Y2T4 447 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FAM215AQ9Y5M1 114 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SEC23IPQ9Y6Y8 1000 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 A0A1B0GVC2 190 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TMEM200CA6NKL6 621 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HSPB2A8KAH6 182 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DVL2O14641 736 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 LDB3O75112 727 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CTAG2O75638 210 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 S100BP04271 92 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CCL3P10147 92 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SLC6A12P48065 614 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ASPHQ12797 758 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 LAPTM5Q13571 262 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HSPB2Q16082 182 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 MSS51Q4VC12 460 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ABHD17CQ6PCB6 329 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TRMT10BQ6PF06 316 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PTPMT1Q8WUK0 201 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 RHBDF1Q96CC6 855 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 LRRC39Q96DD0 335 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PTCD3Q96EY7 689 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 JSRP1Q96MG2 331 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 QRFPRQ96P65 431 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 KRT12Q99456 494 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 EFCAB11Q9BUY7 163 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CXXC4Q9H2H0 198 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 LYRM4Q9HD34 91 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TXNDC16Q9P2K2 825 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ATG4BQ9Y4P1 393 aa11.99□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CYR61O00622 381 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CELA3AP09093 270 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 BMP5P22003 454 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CPN2P22792 545 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ADH7P40394 386 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 MSH2P43246 934 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SSR2P43308 183 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ASCL1P50553 236 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ARL4CP56559 192 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PLIN5Q00G26 463 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ID2Q02363 134 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 MGAT5Q09328 741 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ILF2Q12905 390 aaKnown RBP11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 MORF4L2Q15014 288 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TGFBIQ15582 683 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PDK4Q16654 411 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HYAL4Q2M3T9 481 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 C18orf21Q32NC0 220 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ADPRMQ3LIE5 342 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FLYWCH1Q4VC44 716 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PRAMEF20Q5VT98 475 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SLC22A10Q63ZE4 541 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 RTL6Q6ICC9 239 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 IGDCC3Q8IVU1 814 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DND1Q8IYX4 353 aaKnown RBP11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ZNF321PQ8N8H1 164 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FAM13CQ8NE31 585 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ACTRT1Q8TDG2 376 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SLCO2A1Q92959 643 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 UBE2E3Q969T4 207 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 GAL3ST4Q96RP7 486 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 OSBPL9Q96SU4 736 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CENPKQ9BS16 269 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TBCDQ9BTW9 1192 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PHACTR1Q9C0D0 580 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 EHD1Q9H4M9 534 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CRIM1Q9NZV1 1036 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 MTRF1LQ9UGC7 380 aaKnown RBP11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PLEKHA6Q9Y2H5 1048 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CLDN16Q9Y5I7 305 aa11.98□□□□□ -0.49
TNFRSF1A-207ENST00000535958 C15orf38-AP3S2A0A0A6YYH1 394 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 STK16O75716 305 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FAM155BO75949 473 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PCNAP12004 261 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PIGAP37287 484 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HSPA7P48741 367 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DLX5P56178 289 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TAS2R39P59534 338 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SNTB1Q13884 538 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SF3B4Q15427 424 aaKnown RBP eCLIP11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 MPEG1Q2M385 716 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 AP5B1Q2VPB7 878 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SLC29A4Q7RTT9 530 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ZC3HC1Q86WB0 502 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 GPSM1Q86YR5 675 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ANKMY2Q8IV38 441 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 LIX1LQ8IVB5 337 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 LRRC8AQ8IWT6 810 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 NUBPLQ8TB37 319 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SPACA9Q96E40 222 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TSPAN17Q96FV3 270 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 RBM18Q96H35 190 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ALPK1Q96QP1 1244 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 F2RL3Q96RI0 385 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CNPPD1Q9BV87 410 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DDX47Q9H0S4 455 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ZNF703Q9H7S9 590 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 POPDC3Q9HBV1 291 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms