RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ANKDD1BA6NHY2 528 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 ZNF354AO60765 605 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 BANF1O75531 89 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 STK16O75716 305 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 C1QAP02745 245 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 TCP1P17987 556 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 CD22P20273 847 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 HIST1H1TP22492 207 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 ATP5A1P25705 553 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 CEACAM8P31997 349 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 HNF4AP41235 474 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 GDF5P43026 501 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 STT3AP46977 705 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 ST13P50502 369 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 NR0B1P51843 470 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 PGGT1BP53609 377 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 TERF1P54274 439 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 DLX5P56178 289 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 GPR85P60893 370 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 SLC10A1Q14973 349 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 PAGE2BQ5JRK9 111 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 FBXW8Q8N3Y1 598 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 ZCCHC7Q8N3Z6 543 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 ACOT4Q8N9L9 421 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 SLC2A12Q8TD20 617 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 ZNF473Q8WTR7 871 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 UBTD2Q8WUN7 234 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 UBE2E3Q969T4 207 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 ANKRD9Q96BM1 317 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 ALPK1Q96QP1 1244 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 SMC6Q96SB8 1091 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 SECISBP2Q96T21 854 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 ZNF559Q9BR84 538 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 TMEM79Q9BSE2 394 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 MS4A8Q9BY19 250 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 UCK2Q9BZX2 261 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 PHACTR1Q9C0D0 580 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 DDX47Q9H0S4 455 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 PROK2Q9HC23 129 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 DLL4Q9NR61 685 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 PNPLA3Q9NST1 481 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 DNAJC11Q9NVH1 559 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 CNIH4Q9P003 139 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 SLC17A6Q9P2U8 582 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 Q9UFV3 132 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 FETUBQ9UGM5 382 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 ASIC3Q9UHC3 531 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 MPDZO75970 2070 aa10.36□□□□□ -0.75
CLSTN3-206ENST00000535668 EML6Q6ZMW3 1958 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 NKX2-6A6NCS4 301 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 NPEPPSL1A6NEC2 478 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 A8MUA0 341 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 WDR47O94967 919 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 NADKO95544 446 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 ETHE1O95571 254 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 FBXO45P0C2W1 286 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 ENDOUP21128 410 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 TIMP3P35625 211 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 RFC3P40938 356 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 PIK3CBP42338 1070 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 PCYT1AP49585 367 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 ARL4CP56559 192 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 DOC2AQ14183 400 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 SPRED3Q2MJR0 410 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 NHSL2Q5HYW2 709 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 METTL2BQ6P1Q9 378 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 TMEM81Q6P7N7 255 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 POMZP3Q6PJE2 187 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 IL20RBQ6UXL0 311 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 ZNF793Q6ZN11 406 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 TGIF2LYQ8IUE0 185 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 CCDC71Q8IV32 467 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 CHDHQ8NE62 594 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 C17orf47Q8NEP4 570 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 TANKQ92844 425 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 SENP5Q96HI0 755 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 FBXL20Q96IG2 436 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 ART5Q96L15 291 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 CSF3RQ99062 836 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 GPR22Q99680 433 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 DEFB127Q9H1M4 99 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 ZNF703Q9H7S9 590 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 ZFP64Q9NPA5 681 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 PPANQ9NQ55 473 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 RASSF1Q9NS23 344 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 ZNF629Q9UEG4 869 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 ITGB1BP2Q9UKP3 347 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 EDARQ9UNE0 448 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 CHCHD2Q9Y6H1 151 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 VPS13CQ709C8 3753 aa10.35□□□□□ -0.75
CLSTN3-206ENST00000535668 ARHGAP21Q5T5U3 1957 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 A0A0G2JMM0 328 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 A0A1W2PPB8 328 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 A0A1W2PRS3 328 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 OR6C76A6NM76 312 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 HSPB2A8KAH6 182 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 KIR3DP1A8MWS1 328 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 AHRRA9YTQ3 701 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 C17orf105B2RV13 164 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms