RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ZNF3P17036 446 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 SDHBP21912 280 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 TNFSF8P32971 234 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 LTBRP36941 435 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 NFATC2Q13469 925 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 PFKFB4Q16877 469 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 DPY19L1Q2PZI1 675 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF678Q5SXM1 525 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 MZT2BQ6NZ67 158 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 GCNT7Q6ZNI0 430 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 KRT74Q7RTS7 529 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 ZFPM2Q8WW38 1151 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 ASB15Q8WXK1 588 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 SLC38A4Q969I6 547 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 ZFYVE1Q9HBF4 777 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 MID1IP1Q9NPA3 183 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 RPH3AQ9Y2J0 694 aaPredicted RBP8.64□□□□□ -1.03
SF3B2-216ENST00000534765 ALG5Q9Y673 324 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 OAS3Q9Y6K5 1087 aaKnown RBP8.64□□□□□ -1.03
SF3B2-216ENST00000534765 F5P12259 2224 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 F8W036 122 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 H7C0S8 307 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 PPM1BO75688 479 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 SOD1P00441 154 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 LTA4HP09960 611 aaKnown RBP8.64□□□□□ -1.03
SF3B2-216ENST00000534765 GDF5P43026 501 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 TGM4P49221 684 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 DGKEP52429 567 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 ATP12AP54707 1039 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 BCL2L1Q07817 233 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 GPR153Q6NV75 609 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 AFTPHQ6ULP2 937 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF680Q8NEM1 530 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 CIPCQ9C0C6 399 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 BRD9Q9H8M2 597 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 ACTR8Q9H981 624 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 CMTM6Q9NX76 183 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 COMMD3Q9UBI1 195 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 SERGEFQ9UGK8 458 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 WASHC1A8K0Z3 465 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 CAPN5O15484 640 aaPredicted RBP8.64□□□□□ -1.03
SF3B2-216ENST00000534765 APOA4P06727 396 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 TIMP2P16035 220 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 RAB3AP20336 220 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 OPRD1P41143 372 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 CLCN5P51795 746 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 DCDC1P59894 354 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 COL9A2Q14055 689 aaPredicted RBP8.64□□□□□ -1.03
SF3B2-216ENST00000534765 SBSNQ6UWP8 590 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 Q6ZVL8 140 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 CREB3L2Q70SY1 520 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 RETREG3Q86VR2 466 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 VWA5B2Q8N398 1253 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 OR52B6Q8NGF0 335 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 SLC9A6Q92581 669 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 UBE2FQ969M7 185 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 LRRC58Q96CX6 371 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 CNDP2Q96KP4 475 aaKnown RBP8.64□□□□□ -1.03
SF3B2-216ENST00000534765 GDF15Q99988 308 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 PITHD1Q9GZP4 211 aaPredicted RBP8.64□□□□□ -1.03
SF3B2-216ENST00000534765 OSGEPL1Q9H4B0 414 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 SUV39H2Q9H5I1 410 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 LAMA5O15230 3695 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 A0A096LPI6 279 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 ANXA6P08133 673 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 ALDOCP09972 364 aaKnown RBP8.63□□□□□ -1.03
SF3B2-216ENST00000534765 PRKAR1AP10644 381 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 PAMP19021 973 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 C21orf33P30042 268 aaPredicted RBP8.63□□□□□ -1.03
SF3B2-216ENST00000534765 HOXA9P31269 272 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 WASP42768 502 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 OR4D2P58180 307 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 ADARB1P78563 741 aaKnown RBP8.63□□□□□ -1.03
SF3B2-216ENST00000534765 CREMQ03060 361 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 TFF2Q03403 129 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 CDK5R2Q13319 367 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 TSTA3Q13630 321 aaPredicted RBP8.63□□□□□ -1.03
SF3B2-216ENST00000534765 IL18Q14116 193 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 LCN1P1Q5VSP4 162 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 CES5AQ6NT32 575 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 TEX47Q8TBZ9 253 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 TMEM203Q969S6 136 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 SCRN2Q96FV2 425 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 TEX37Q96LM6 180 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 RBM4BQ9BQ04 359 aaKnown RBP8.63□□□□□ -1.03
SF3B2-216ENST00000534765 RBM4Q9BWF3 364 aaKnown RBP8.63□□□□□ -1.03
SF3B2-216ENST00000534765 GPR63Q9BZJ6 419 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 SH3BP4Q9P0V3 963 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 PRELID3BQ9Y3B1 194 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 TRBV5-4A0A0C4DH59 114 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 LOC102723532A0A0G2JNH3 316 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 ARNTLO00327 626 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 MYL12BO14950 172 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 KPNA5O15131 536 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 TAPBPO15533 448 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 RFPL3O75679 317 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 CDK14O94921 469 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 CAPNS1P04632 268 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 FABP1P07148 127 aa8.63□□□□□ -1.03
SF3B2-216ENST00000534765 MYL12AP19105 171 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms