RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 ATE1O95260 518 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 TBX6O95947 436 aaPredicted RBP13.77□□□□□ -0.21
CTSB-230ENST00000534149 GDF5P43026 501 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 ID2Q02363 134 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 ASPHQ12797 758 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 KEAP1Q14145 624 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 SPANXN3Q5MJ09 141 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 PRAMEF20Q5VT98 475 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 FAM45BPQ6NSW5 357 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 TRIM40Q6P9F5 258 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 ADGRD1Q6QNK2 874 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 SLCO4C1Q6ZQN7 724 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 FBXW8Q8N3Y1 598 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 TNIP2Q8NFZ5 429 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 OR2L5Q8NG80 312 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 OR5L2Q8NGL0 311 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 FAM45AQ8TCE6 357 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 CERS2Q96G23 380 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 RUNDC3BQ96NL0 473 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 SERINC2Q96SA4 455 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 REXO4Q9GZR2 422 aaKnown RBP13.77□□□□□ -0.21
CTSB-230ENST00000534149 COPS7BQ9H9Q2 264 aaPredicted RBP13.77□□□□□ -0.21
CTSB-230ENST00000534149 PPANQ9NQ55 473 aaKnown RBP13.77□□□□□ -0.21
CTSB-230ENST00000534149 CLEC3AO75596 197 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 ETHE1O95571 254 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 TTC4O95801 387 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 ZNF37AP17032 561 aaPredicted RBP13.76□□□□□ -0.21
CTSB-230ENST00000534149 GNAZP19086 355 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 ADSLP30566 484 aaPredicted RBP13.76□□□□□ -0.21
CTSB-230ENST00000534149 TRPC1P48995 793 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 MTTPP55157 894 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 KCNJ2P63252 427 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 RCN2Q14257 317 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 EFTUD2Q15029 972 aaKnown RBP eCLIP13.76□□□□□ -0.215e-7■■■□□ 18.7
CTSB-230ENST00000534149 DAZAP2Q15038 168 aaPredicted RBP13.76□□□□□ -0.21
CTSB-230ENST00000534149 ADPRMQ3LIE5 342 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 PIGGQ5H8A4 983 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 TEDDM1Q5T9Z0 273 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 ADNP2Q6IQ32 1131 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 ABHD17CQ6PCB6 329 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 CCDC137Q6PK04 289 aaKnown RBP13.76□□□□□ -0.21
CTSB-230ENST00000534149 VN1R5Q7Z5H4 357 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 GALNT7Q86SF2 657 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 PPIL6Q8IXY8 311 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 KRT78Q8N1N4 520 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 ZNF721Q8TF20 911 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 LRRC46Q96FV0 321 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 PDLIM5Q96HC4 596 aaKnown RBP13.76□□□□□ -0.21
CTSB-230ENST00000534149 C18orf12Q96KH6 178 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 SH2D2AQ9NP31 389 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 COPS7AQ9UBW8 275 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 KIAA1549Q9HCM3 1950 aa13.76□□□□□ -0.21
CTSB-230ENST00000534149 ANKDD1BA6NHY2 528 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 LRRC3CA6NJW4 275 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 LRATO95237 230 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 INHBBP09529 407 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 GSTM2P28161 218 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 CDKL1Q00532 357 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 SERTAD2Q14140 314 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 ZNF460Q14592 562 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 MPEG1Q2M385 716 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 ZNF791Q3KP31 576 aaPredicted RBP13.75□□□□□ -0.21
CTSB-230ENST00000534149 FBXL19-AS1Q494R0 122 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 ACSF3Q4G176 576 aaPredicted RBP13.75□□□□□ -0.21
CTSB-230ENST00000534149 MSS51Q4VC12 460 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 RNASEH2BQ5TBB1 312 aaKnown RBP13.75□□□□□ -0.21
CTSB-230ENST00000534149 SLC22A10Q63ZE4 541 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 TMEM198Q66K66 360 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 CLEC9AQ6UXN8 241 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 TAOK1Q7L7X3 1001 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 IGDCC3Q8IVU1 814 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 C9orf40Q8IXQ3 194 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 LIX1Q8N485 282 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 NEIL3Q8TAT5 605 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 PAQR8Q8TEZ7 354 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 MS4A14Q96JA4 679 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 JSRP1Q96MG2 331 aaPredicted RBP13.75□□□□□ -0.21
CTSB-230ENST00000534149 ZFP64Q9NPA5 681 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 MTRF1LQ9UGC7 380 aaKnown RBP13.75□□□□□ -0.21
CTSB-230ENST00000534149 CORO1CQ9ULV4 474 aaPredicted RBP13.75□□□□□ -0.21
CTSB-230ENST00000534149 BOKQ9UMX3 212 aaPredicted RBP13.75□□□□□ -0.21
CTSB-230ENST00000534149 OARD1Q9Y530 152 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 PCDHGB3Q9Y5G1 929 aa13.75□□□□□ -0.21
CTSB-230ENST00000534149 TUBAL3A6NHL2 446 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 HOXC12P31275 282 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 CEACAM8P31997 349 aaPredicted RBP13.74□□□□□ -0.21
CTSB-230ENST00000534149 SLC6A12P48065 614 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 HNMTP50135 292 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 TSNQ15631 228 aaKnown RBP13.74□□□□□ -0.21
CTSB-230ENST00000534149 POMZP3Q6PJE2 187 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 LYPD8Q6UX82 237 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 ZNF793Q6ZN11 406 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 CHSY3Q70JA7 882 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 FRA10AC1Q70Z53 315 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 KRTAP1-3Q8IUG1 177 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 LRRC25Q8N386 305 aaPredicted RBP13.74□□□□□ -0.21
CTSB-230ENST00000534149 TRIM58Q8NG06 486 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 LINC01560Q8TB33 94 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 SLC22A8Q8TCC7 542 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 KIAA1191Q96A73 305 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms