RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	ELN	P15502	786 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	SERPINA4	P29622	427 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	PDHA2	P29803	388 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	CCR2	P41597	374 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	PNLIPRP1	P54315	467 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ARPP19	P56211	112 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	RPS13	P62277	151 aa	Known RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	LARS2	Q15031	903 aa	Known RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	TST	Q16762	297 aa	Known RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	DUSP6	Q16828	381 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	TXNDC8	Q6A555	127 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	RETSAT	Q6NUM9	610 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	QSOX2	Q6ZRP7	698 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF621	Q6ZSS3	439 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	NR2C2AP	Q86WQ0	139 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	TCTE3	Q8IZS6	198 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	DEPDC4	Q8N2C3	294 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	AMER2	Q8N7J2	671 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ATG16L2	Q8NAA4	619 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	POGLUT1	Q8NBL1	392 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	PROKR2	Q8NFJ6	384 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	SLC38A5	Q8WUX1	472 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	SLC30A2	Q9BRI3	323 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	SLC35A5	Q9BS91	424 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ATG10	Q9H0Y0	220 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	MIR1-1HG	Q9H1L0	117 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ABCG8	Q9H221	673 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ABCB10	Q9NRK6	738 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	PIPSL	A2A3N6	862 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	HMX3	A6NHT5	357 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	MYO1G	B0I1T2	1018 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	KDM4E	B2RXH2	506 aa	Predicted RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ERVH48-1	M5A8F1	160 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	PSMD11	O00231	422 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	TSPAN6	O43657	245 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	PARN	O95453	639 aa	Known RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	OPN1SW	P03999	348 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ANXA4	P09525	319 aa	Predicted RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	TFPI	P10646	304 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	IL7	P13232	177 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ITGA2	P17301	1181 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	CYP2A7	P20853	494 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	S100A1	P23297	94 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	VIPR1	P32241	457 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ETV5	P41161	510 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	SOX3	P41225	446 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	KCNJ5	P48544	419 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ETV1	P50549	477 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ATN1	P54259	1190 aa	Predicted RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	LSM11	P83369	360 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	TPBG	Q13641	420 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	STARD3	Q14849	445 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	EOGT	Q5NDL2	527 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	BHLHB9	Q6PI77	547 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	PAQR6	Q6TCH4	344 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	SLC30A8	Q8IWU4	369 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	HORMAD2	Q8N7B1	307 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	FAM46D	Q8NEK8	389 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	OR52I1	Q8NGK6	324 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	OR4A15	Q8NGL6	344 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	POLDIP3	Q9BY77	421 aa	Known RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	MVB12B	Q9H7P6	319 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	B3GAT2	Q9NPZ5	323 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	TAS2R7	Q9NYW3	318 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	MARK1	Q9P0L2	795 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	RAPGEFL1	Q9UHV5	662 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ACSL6	Q9UKU0	697 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	STUB1	Q9UNE7	303 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ANGPTL3	Q9Y5C1	460 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	MAU2	Q9Y6X3	613 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	COL5A1	P20908	1838 aa	Predicted RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897		A0A1W2PRQ8	180 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897		B4DXG7	233 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	HYAL3	O43820	417 aa	Predicted RBP	4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	PRKY	O43930	277 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	KDM1A	O60341	852 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	CCNB2	O95067	398 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	IL1A	P01583	271 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	THY1	P04216	161 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	CISD3	P0C7P0	127 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	HLA-DMA	P28067	261 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	BTC	P35070	178 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	MLLT3	P42568	568 aa	Predicted RBP	4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	KIR2DL3	P43628	341 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	BDKRB1	P46663	353 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	SEPHS1	P49903	392 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ARHGDIA	P52565	204 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	CDH12	P55289	794 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	WDR5	P61964	334 aa	Known RBP	4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	CDK6	Q00534	326 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	TAP2	Q03519	686 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF91	Q05481	1191 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	SLAMF1	Q13291	335 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	GAB4	Q2WGN9	574 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	LEXM	Q3ZCV2	418 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	SYT14P1	Q58G82	188 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	XKR6	Q5GH73	641 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	GCNT6	Q5T4J0	391 aa		4.19	□□□□□ -1.74

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