RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CASTP20810 708 aaKnown RBP2.05□□□□□ -2.08
BRCA2-205ENST00000533776 ACKR3P25106 362 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 SLC1A4P43007 532 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 IER3P46695 156 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 GPR50Q13585 617 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 CYLC2Q14093 348 aaPredicted RBP2.05□□□□□ -2.08
BRCA2-205ENST00000533776 HERC4Q5GLZ8 1057 aaPredicted RBP2.05□□□□□ -2.08
BRCA2-205ENST00000533776 NHSL2Q5HYW2 709 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 NHLRC3Q5JS37 347 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 ZNF506Q5JVG8 444 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 MUC21Q5SSG8 566 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 TEX35Q5T0J7 233 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 PLPP4Q5VZY2 271 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 ZNF776Q68DI1 518 aaPredicted RBP2.05□□□□□ -2.08
BRCA2-205ENST00000533776 VASH2Q86V25 355 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 TBC1D10CQ8IV04 446 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 HSCBQ8IWL3 235 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 AQP12AQ8IXF9 295 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 RNF149Q8NC42 400 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 PCNPQ8WW12 178 aaKnown RBP2.05□□□□□ -2.08
BRCA2-205ENST00000533776 CKAP2Q8WWK9 683 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 ZNF285Q96NJ3 590 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 ANKRD27Q96NW4 1050 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 RCHY1Q96PM5 261 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 SDHCQ99643 169 aaPredicted RBP2.05□□□□□ -2.08
BRCA2-205ENST00000533776 C17orf62Q9BQA9 187 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 ZNF559Q9BR84 538 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 LIME1Q9H400 295 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 ZNF665Q9H7R5 613 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 SRD5A3Q9H8P0 318 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 SP140LQ9H930 580 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 SH3GLB2Q9NR46 395 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 MRPL17Q9NRX2 175 aaKnown RBP2.05□□□□□ -2.08
BRCA2-205ENST00000533776 FAM212BQ9NTI7 297 aaPredicted RBP2.05□□□□□ -2.08
BRCA2-205ENST00000533776 CUTCQ9NTM9 273 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 MED17Q9NVC6 651 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 SLCO1C1Q9NYB5 712 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 THYN1Q9P016 225 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 IL17CQ9P0M4 197 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 SEPT10Q9P0V9 454 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 MGAT4AQ9UM21 535 aa2.05□□□□□ -2.08
BRCA2-205ENST00000533776 NIP7Q9Y221 180 aaKnown RBP eCLIP2.05□□□□□ -2.08
BRCA2-205ENST00000533776 TEX48A0A1B0GUV7 120 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 OR5H15A6NDH6 313 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 H0YIG0 161 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 M0R296 226 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 CLN5O75503 358 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 LETM1O95202 739 aaPredicted RBP2.04□□□□□ -2.08
BRCA2-205ENST00000533776 FGF19O95750 216 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 SEMA4FO95754 770 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 CENPBP07199 599 aaPredicted RBP2.04□□□□□ -2.08
BRCA2-205ENST00000533776 GIG44P09565 113 aaPredicted RBP2.04□□□□□ -2.08
BRCA2-205ENST00000533776 SKILP12757 684 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 ID1P41134 155 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 MAGEB1P43366 347 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 BFSP1Q12934 665 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 POM121L1PQ3SYA9 428 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 TIMM50Q3ZCQ8 353 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 CCDC158Q5M9N0 1113 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 LINC00242Q5T6M2 205 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 ARMC3Q5W041 872 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 ZNF730Q6ZMV8 503 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 MSANTD1Q6ZTZ1 278 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 HOOK3Q86VS8 718 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 NLRP14Q86W24 1093 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 CACUL1Q86Y37 369 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 TUSC5Q8IXB3 177 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 OR8H3Q8N146 312 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 CARNMT1Q8N4J0 409 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 OR1B1Q8NGR6 318 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 OR6F1Q8NGZ6 308 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 AFAP1L1Q8TED9 768 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 NUS1Q96E22 293 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 RUNDC3BQ96NL0 473 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 ERGIC2Q96RQ1 377 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 RASL10BQ96S79 203 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 CCM2Q9BSQ5 444 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 ASB8Q9H765 288 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 GRPEL1Q9HAV7 217 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 NMUR1Q9HB89 426 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 S100A14Q9HCY8 104 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 TUFT1Q9NNX1 390 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 GPR173Q9NS66 373 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 VPS18Q9P253 973 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 ZNF319Q9P2F9 582 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 UBQLN2Q9UHD9 624 aa2.04□□□□□ -2.08
BRCA2-205ENST00000533776 MAGEB16A2A368 324 aa2.03□□□□□ -2.08
BRCA2-205ENST00000533776 OOEPA6NGQ2 149 aa2.03□□□□□ -2.08
BRCA2-205ENST00000533776 NEDD8-MDP1E9PL57 170 aa2.03□□□□□ -2.08
BRCA2-205ENST00000533776 ATP9AO75110 1047 aa2.03□□□□□ -2.08
BRCA2-205ENST00000533776 RAD51DO75771 328 aa2.03□□□□□ -2.08
BRCA2-205ENST00000533776 HCKP08631 526 aa2.03□□□□□ -2.08
BRCA2-205ENST00000533776 ODC1P11926 461 aa2.03□□□□□ -2.08
BRCA2-205ENST00000533776 SLC3A1Q07837 685 aa2.03□□□□□ -2.08
BRCA2-205ENST00000533776 FASTKQ14296 549 aaKnown RBP2.03□□□□□ -2.08
BRCA2-205ENST00000533776 ACKR1Q16570 336 aa2.03□□□□□ -2.08
BRCA2-205ENST00000533776 TTC31Q49AM3 519 aaPredicted RBP2.03□□□□□ -2.08
BRCA2-205ENST00000533776 SLC22A6Q4U2R8 563 aa2.03□□□□□ -2.08
BRCA2-205ENST00000533776 ALKBH5Q6P6C2 394 aaKnown RBP2.03□□□□□ -2.08
BRCA2-205ENST00000533776 NHLRC1Q6VVB1 395 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms