RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 C12orf65Q9H3J6 166 aaKnown RBP17.64■□□□□ 0.41
SSH3-209ENST00000532600 LIN28AQ9H9Z2 209 aaKnown RBP17.64■□□□□ 0.41
SSH3-209ENST00000532600 LYRM4Q9HD34 91 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 OPTCQ9UBM4 332 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 A0A088AWK7 358 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 NPIPA5E9PKD4 350 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 CLDN4O14493 209 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 SLC19A2O60779 497 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 SCELO95171 688 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 PCNAP12004 261 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 CREB1P16220 341 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 KRT4P19013 534 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 ZNF10P21506 573 aaPredicted RBP17.63■□□□□ 0.41
SSH3-209ENST00000532600 ALDH6A1Q02252 535 aaKnown RBP17.63■□□□□ 0.41
SSH3-209ENST00000532600 SLC18A2Q05940 514 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 HIST2H2ACQ16777 129 aaPredicted RBP17.63■□□□□ 0.41
SSH3-209ENST00000532600 TSNAXIP1Q2TAA8 658 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 CEP85LQ5SZL2 805 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 HIST2H2AA3Q6FI13 130 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 GRHL2Q6ISB3 625 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 MED27Q6P2C8 311 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 KLC3Q6P597 504 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 LRIG3Q6UXM1 1119 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 MDGA2Q7Z553 956 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 FGD2Q7Z6J4 655 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 TEX9Q8N6V9 391 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 ANKRD9Q96BM1 317 aaPredicted RBP17.63■□□□□ 0.41
SSH3-209ENST00000532600 VMP1Q96GC9 406 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 SCYL1Q96KG9 808 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 TBCDQ9BTW9 1192 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 OR51B5Q9H339 312 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 ADAP2Q9NPF8 381 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 CPSF2Q9P2I0 782 aaKnown RBP17.63■□□□□ 0.41
SSH3-209ENST00000532600 SH3BGRL2Q9UJC5 107 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 TINAGQ9UJW2 476 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 FBXW2Q9UKT8 454 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 NPIPA1Q9UND3 350 aa17.63■□□□□ 0.41
SSH3-209ENST00000532600 LRBAP50851 2863 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 CCDC189A1A4V9 331 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 CCL21O00585 134 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 LDB3O75112 727 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 ITGA10O75578 1167 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 HIST1H1TP22492 207 aaPredicted RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 HPDP32754 393 aaPredicted RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 HSF1Q00613 529 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 ID2Q02363 134 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 CASP8Q14790 479 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 ELAVL1Q15717 326 aaKnown RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 PFKFB4Q16877 469 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 TNFAIP8L3Q5GJ75 292 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 DEPDC1Q5TB30 811 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 KHDRBS2Q5VWX1 349 aaKnown RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 Q6ZPB1 254 aaPredicted RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 HORMAD2Q8N7B1 307 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 HUS1BQ8NHY5 278 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 SREK1Q8WXA9 508 aaKnown RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 MRPL57Q9BQC6 102 aaKnown RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 ZNF717Q9BY31 904 aaPredicted RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 ALOXE3Q9BYJ1 711 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 COPS7BQ9H9Q2 264 aaPredicted RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 VTI1BQ9UEU0 232 aa17.62■□□□□ 0.41
SSH3-209ENST00000532600 MRPS33Q9Y291 106 aaKnown RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 NCOA6Q14686 2063 aaPredicted RBP17.62■□□□□ 0.41
SSH3-209ENST00000532600 SYCE1LA8MT33 242 aa17.61■□□□□ 0.41
SSH3-209ENST00000532600 FCHO1O14526 889 aa17.61■□□□□ 0.41
SSH3-209ENST00000532600 SIX3O95343 332 aaPredicted RBP17.61■□□□□ 0.41
SSH3-209ENST00000532600 RBP1P09455 135 aa17.61■□□□□ 0.41
SSH3-209ENST00000532600 EPB42P16452 691 aa17.61■□□□□ 0.41
SSH3-209ENST00000532600 GRNP28799 593 aaKnown RBP17.61■□□□□ 0.41
SSH3-209ENST00000532600 ADORA2A-AS1P86434 159 aa17.61■□□□□ 0.41
SSH3-209ENST00000532600 TMEM35AQ53FP2 167 aa17.61■□□□□ 0.41
SSH3-209ENST00000532600 KRTCAP3Q53RY4 240 aa17.61■□□□□ 0.41
SSH3-209ENST00000532600 SULF2Q8IWU5 870 aa17.61■□□□□ 0.41
SSH3-209ENST00000532600 CNPY4Q8N129 248 aa17.61■□□□□ 0.41
SSH3-209ENST00000532600 UBE2E3Q969T4 207 aa17.61■□□□□ 0.41
SSH3-209ENST00000532600 MRPL46Q9H2W6 279 aaKnown RBP17.61■□□□□ 0.41
SSH3-209ENST00000532600 PLPP1O14494 284 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 ASNA1O43681 348 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 FGF17O60258 216 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 ZNF354AO60765 605 aaPredicted RBP17.6■□□□□ 0.41
SSH3-209ENST00000532600 ZFAND5O76080 213 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 IFNA16P05015 189 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 GSTA1P08263 222 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 CRHR1P34998 444 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 RFC3P40938 356 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 MEOX1P50221 254 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 NR0B1P51843 470 aaKnown RBP17.6■□□□□ 0.41
SSH3-209ENST00000532600 ALDH18A1P54886 795 aaKnown RBP17.6■□□□□ 0.41
SSH3-209ENST00000532600 IGLV3-21P80748 117 aaPredicted RBP17.6■□□□□ 0.41
SSH3-209ENST00000532600 TGM3Q08188 693 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 DDX39BQ13838 428 aaKnown RBP17.6■□□□□ 0.41
SSH3-209ENST00000532600 PCBP2Q15366 365 aaKnown RBP eCLIP17.6■□□□□ 0.41
SSH3-209ENST00000532600 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.6■□□□□ 0.41
SSH3-209ENST00000532600 OR4C11Q6IEV9 310 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 DGAT2L6Q6ZPD8 337 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 NCCRP1Q6ZVX7 275 aaPredicted RBP17.6■□□□□ 0.41
SSH3-209ENST00000532600 GOLGA7Q7Z5G4 137 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 LCA5Q86VQ0 697 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 SPPL2CQ8IUH8 684 aa17.6■□□□□ 0.41
SSH3-209ENST00000532600 SRRM1Q8IYB3 904 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms