RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 BUD31P41223 144 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-208ENST00000532560 CD97P48960 835 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 ASPHQ12797 758 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 SERTAD2Q14140 314 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 TTMPQ5BVD1 217 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 TCHHL1Q5QJ38 904 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-208ENST00000532560 CEP85LQ5SZL2 805 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 FAM219BQ5XKK7 198 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 SLC6A19Q695T7 634 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 CYP20A1Q6UW02 462 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 PAGE2Q7Z2X7 111 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 CLNKQ7Z7G1 428 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 METTL4Q8N3J2 472 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 ZADH2Q8N4Q0 377 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 SIRT6Q8N6T7 355 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 C7orf57Q8NEG2 295 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 METTL6Q8TCB7 284 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 TCP10LQ8TDR4 215 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 MRPL1Q9BYD6 325 aaKnown RBP14.08□□□□□ -0.16
CPSF1-208ENST00000532560 EPN3Q9H201 632 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 TMBIM4Q9HC24 238 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 ZBTB20Q9HC78 741 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-208ENST00000532560 SSU72Q9NP77 194 aaKnown RBP14.08□□□□□ -0.16
CPSF1-208ENST00000532560 ADAP2Q9NPF8 381 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 NMRK1Q9NWW6 199 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 PTGFRNQ9P2B2 879 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 ATG4BQ9Y4P1 393 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 ASB4Q9Y574 426 aa14.08□□□□□ -0.16
CPSF1-208ENST00000532560 SETXQ7Z333 2677 aaKnown RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 PROM1O43490 865 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 TRIM13O60858 407 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 FAM58BPP0C7Q3 252 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 NR2F6P10588 404 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 CREB1P16220 341 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 PPP2R1BP30154 601 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 TLX1P31314 330 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 IGLV3-21P80748 117 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 GALNT1Q10472 559 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 TBL3Q12788 808 aaKnown RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 ELAVL1Q15717 326 aaKnown RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 TNFAIP8L3Q5GJ75 292 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 H3F3CQ6NXT2 135 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 Q6ZS92 163 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 COMMD6Q7Z4G1 85 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 AMER2Q8N7J2 671 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 GBP7Q8N8V2 638 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 NFAM1Q8NET5 270 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 ELP5Q8TE02 316 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 TANKQ92844 425 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 PGM2Q96G03 612 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 KCNA7Q96RP8 456 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 HBEGFQ99075 208 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 TRMOQ9BU70 441 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 GATA5Q9BWX5 397 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 RPF2Q9H7B2 306 aaKnown RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 TEKT2Q9UIF3 430 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 PPIEQ9UNP9 301 aaKnown RBP14.07□□□□□ -0.16
CPSF1-208ENST00000532560 B3GNT3Q9Y2A9 372 aa14.07□□□□□ -0.16
CPSF1-208ENST00000532560 SERTM1A2A2V5 107 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 FGF17O60258 216 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 LDB3O75112 727 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 MYO1DO94832 1006 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 AIFM1O95831 613 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 TPP2P29144 1249 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-208ENST00000532560 ALDH3A1P30838 453 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 HTR6P50406 440 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 TAS2R50P59544 299 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 GNGT1P63211 74 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 STX4Q12846 297 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 COLEC12Q5KU26 742 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 ABHD17BQ5VST6 288 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 B3GNTL1Q67FW5 361 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-208ENST00000532560 C18orf63Q68DL7 685 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 LINC00696Q6ZRV3 163 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 Q8NA96 180 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 B3GNT7Q8NFL0 401 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 ANKRD9Q96BM1 317 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-208ENST00000532560 ARL8AQ96BM9 186 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 CNDP1Q96KN2 507 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 MFRPQ9BY79 579 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 ALOXE3Q9BYJ1 711 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 ACPTQ9BZG2 426 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 RNF32Q9H0A6 362 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 KCNK13Q9HB14 408 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 PNO1Q9NRX1 252 aaKnown RBP14.06□□□□□ -0.16
CPSF1-208ENST00000532560 VPS29Q9UBQ0 182 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 VTI1BQ9UEU0 232 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 TIMM22Q9Y584 194 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 ACTL7BQ9Y614 415 aa14.06□□□□□ -0.16
CPSF1-208ENST00000532560 A0A1W2PR48 441 aa14.05□□□□□ -0.16
CPSF1-208ENST00000532560 ARHGAP10A1A4S6 786 aa14.05□□□□□ -0.16
CPSF1-208ENST00000532560 A8MUA0 341 aa14.05□□□□□ -0.16
CPSF1-208ENST00000532560 EBAG9O00559 213 aa14.05□□□□□ -0.16
CPSF1-208ENST00000532560 PRKRAO75569 313 aaKnown RBP14.05□□□□□ -0.16
CPSF1-208ENST00000532560 GBAP04062 536 aa14.05□□□□□ -0.16
CPSF1-208ENST00000532560 KLK1P06870 262 aa14.05□□□□□ -0.16
CPSF1-208ENST00000532560 ETV4P43268 484 aa14.05□□□□□ -0.16
CPSF1-208ENST00000532560 FOXA1P55317 472 aa14.05□□□□□ -0.16
CPSF1-208ENST00000532560 TLE1Q04724 770 aa14.05□□□□□ -0.16
CPSF1-208ENST00000532560 BIKQ13323 160 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms