RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 PHOSPHO2Q8TCD6 241 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 RFT1Q96AA3 541 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ZFP3Q96NJ6 502 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 TRIM62Q9BVG3 475 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 NUSAP1Q9BXS6 441 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 DNTTIP1Q9H147 329 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 WWOXQ9NZC7 414 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 FNIP2Q9P278 1114 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 DNMT3BQ9UBC3 853 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 C5orf42Q9H799 3197 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 A0A096LPI6 279 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 TEX13CA0A0J9YWL9 993 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 C2CD4BA6NLJ0 364 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF487B1APH4 448 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 MMP20O60882 483 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 KHDRBS3O75525 346 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 PPM1BO75688 479 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 UROSP10746 265 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ZP3P21754 424 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ALAS2P22557 587 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 C21orf33P30042 268 aaPredicted RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 MAT2AP31153 395 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC35A2P78381 396 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 EMX2Q04743 252 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 GRB7Q14451 532 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 FCN2Q15485 313 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 CYP27C1Q4G0S4 372 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 TMEM31Q5JXX7 168 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC35F1Q5T1Q4 408 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 HECTD2Q5U5R9 776 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 HSDL2Q6YN16 418 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 CYP4Z2PQ8N1L4 340 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 DTWD1Q8N5C7 304 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 OR1M1Q8NGA1 313 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 MOSPD2Q8NHP6 518 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 THAP6Q8TBB0 222 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 TNFAIP8L1Q8WVP5 186 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ZFPM2Q8WW38 1151 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 FKBP10Q96AY3 582 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 FUBP3Q96I24 572 aaKnown RBP eCLIP6.52□□□□□ -1.374e-6■□□□□ 9.6
TGFBR3-209ENST00000532540 C12orf66Q96MD2 445 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC46A2Q9BY10 475 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SYNDIG1Q9H7V2 258 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 DEC1Q9P2X7 70 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ZMYM5Q9UJ78 669 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 FCF1Q9Y324 198 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 PTPRFP10586 1907 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 FOCADQ5VW36 1801 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 LOC105369274A0A096LPK9 316 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF840PA6NDX5 716 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ANKDD1BA6NHY2 528 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 POM121CA8CG34 1229 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 WASH3PC4AMC7 463 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CCL22O00626 93 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 AKAP8O43823 692 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 VIPP01282 170 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 AHSGP02765 367 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 IFNA4P05014 189 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 EPHX1P07099 455 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ITGAMP11215 1152 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ICAM2P13598 275 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CTPS1P17812 591 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GGT5P36269 586 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 PIGAP37287 484 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CDKN2CP42773 168 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 VSX2P58304 361 aaPredicted RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 RAB33AQ14088 237 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 LPAL2Q16609 132 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CTU2Q2VPK5 515 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ATXN7L2Q5T6C5 722 aaPredicted RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ELP2Q6IA86 826 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 RAB12Q6IQ22 244 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 FBXL22Q6P050 247 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ZCCHC12Q6PEW1 402 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ENPP6Q6UWR7 440 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GAREM2Q75VX8 874 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CYP4Z1Q86W10 505 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 TMEM25Q86YD3 366 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GPSM1Q86YR5 675 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ZDHHC17Q8IUH5 632 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 LAX1Q8IWV1 398 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 OR4N4Q8N0Y3 316 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF454Q8N9F8 522 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GPR156Q8NFN8 814 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 RPLP0P6Q8NHW5 317 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 FUZQ9BT04 418 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 IFT27Q9BW83 186 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 OSER1Q9NX31 292 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 THUMPD1Q9NXG2 353 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 FBXL12Q9NXK8 326 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GPR83Q9NYM4 423 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CPNE7Q9UBL6 633 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 EIF2B4Q9UI10 523 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 SARDHQ9UL12 918 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ERVW-1Q9UQF0 538 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 DHRS7Q9Y394 339 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 KLK4Q9Y5K2 254 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 A0A0U1RQS6 177 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 HMX2A2RU54 273 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms