RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 FAM45BPQ6NSW5 357 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 ABHD17CQ6PCB6 329 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 TRMT10BQ6PF06 316 aaKnown RBP19.4■□□□□ 0.7
CHKA-206ENST00000531341 OPN5Q6U736 354 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 LYPD8Q6UX82 237 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 GALNT7Q86SF2 657 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 GAS2L3Q86XJ1 694 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 OR8K3Q8NH51 312 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 FAM45AQ8TCE6 357 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 ZNF721Q8TF20 911 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 SERINC2Q96SA4 455 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 EGFL8Q99944 293 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 ZNF703Q9H7S9 590 aaPredicted RBP19.4■□□□□ 0.7
CHKA-206ENST00000531341 PRDM7Q9NQW5 492 aa19.4■□□□□ 0.7
CHKA-206ENST00000531341 ZNF490Q9ULM2 529 aaPredicted RBP19.4■□□□□ 0.7
CHKA-206ENST00000531341 LRRC3CA6NJW4 275 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 H2AFYO75367 372 aaKnown RBP19.39■□□□□ 0.69
CHKA-206ENST00000531341 CLEC3AO75596 197 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 GNAZP19086 355 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 SLC6A12P48065 614 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 STX4Q12846 297 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 DAZAP2Q15038 168 aaPredicted RBP19.39■□□□□ 0.69
CHKA-206ENST00000531341 CYP1B1Q16678 543 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 DEFB113Q30KQ7 82 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 HP1BP3Q5SSJ5 553 aaPredicted RBP19.39■□□□□ 0.69
CHKA-206ENST00000531341 DGAT2L6Q6ZPD8 337 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 UBE3DQ7Z6J8 389 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 KRTAP1-3Q8IUG1 177 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 RASGEF1CQ8N431 466 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 DOK4Q8TEW6 326 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 FAM222BQ8WU58 562 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 ANKRD49Q8WVL7 239 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 RNASE6Q93091 150 aaKnown RBP19.39■□□□□ 0.69
CHKA-206ENST00000531341 ANKRD9Q96BM1 317 aaPredicted RBP19.39■□□□□ 0.69
CHKA-206ENST00000531341 RUNDC3BQ96NL0 473 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 F2RL3Q96RI0 385 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 MAPKAP1Q9BPZ7 522 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 PPANQ9NQ55 473 aaKnown RBP19.39■□□□□ 0.69
CHKA-206ENST00000531341 OARD1Q9Y530 152 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 NCKAP5O14513 1909 aa19.39■□□□□ 0.69
CHKA-206ENST00000531341 NSD1Q96L73 2696 aaPredicted RBP19.38■□□□□ 0.69
CHKA-206ENST00000531341 HSPB2A8KAH6 182 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 FAM47E-STBD1D6RA91 191 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 HRKO00198 91 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 LRATO95237 230 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 ZNF37AP17032 561 aaPredicted RBP19.38■□□□□ 0.69
CHKA-206ENST00000531341 TACR1P25103 407 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 HOXC12P31275 282 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 TRPC1P48995 793 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 MTTPP55157 894 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 CDKL1Q00532 357 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 HSPB2Q16082 182 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 FBXO48Q5FWF7 155 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 SLC22A10Q63ZE4 541 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 TRIM40Q6P9F5 258 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 ZNF793Q6ZN11 406 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 CAMKMTQ7Z624 323 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 C9orf40Q8IXQ3 194 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 TTLQ8NG68 377 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 OR5L2Q8NGL0 311 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 NEIL3Q8TAT5 605 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 KIAA1191Q96A73 305 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 RHBDF1Q96CC6 855 aa19.38■□□□□ 0.69
CHKA-206ENST00000531341 TTC4O95801 387 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 RAF1P04049 648 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 CDC25BP30305 580 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 CEACAM8P31997 349 aaPredicted RBP19.37■□□□□ 0.69
CHKA-206ENST00000531341 ASCL1P50553 236 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 TSNQ15631 228 aaKnown RBP19.37■□□□□ 0.69
CHKA-206ENST00000531341 MPEG1Q2M385 716 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 TMEM198Q66K66 360 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 ZNF662Q6ZS27 426 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 BIVMQ86UB2 503 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 OR4N5Q8IXE1 308 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 LRRC25Q8N386 305 aaPredicted RBP19.37■□□□□ 0.69
CHKA-206ENST00000531341 TRIM58Q8NG06 486 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 LINC01560Q8TB33 94 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 PAQR8Q8TEZ7 354 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 PPWD1Q96BP3 646 aaKnown RBP19.37■□□□□ 0.69
CHKA-206ENST00000531341 WDR83Q9BRX9 315 aaKnown RBP19.37■□□□□ 0.69
CHKA-206ENST00000531341 NT5DC2Q9H857 520 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 PLEKHF2Q9H8W4 249 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 ZFP64Q9NPA5 681 aa19.37■□□□□ 0.69
CHKA-206ENST00000531341 A0A088AWK7 358 aa19.36■□□□□ 0.69
CHKA-206ENST00000531341 ANKDD1BA6NHY2 528 aa19.36■□□□□ 0.69
CHKA-206ENST00000531341 NCF1BA6NI72 391 aaPredicted RBP19.36■□□□□ 0.69
CHKA-206ENST00000531341 NCF1CA8MVU1 366 aaPredicted RBP19.36■□□□□ 0.69
CHKA-206ENST00000531341 RTCAO00442 366 aaKnown RBP19.36■□□□□ 0.69
CHKA-206ENST00000531341 TAPBPO15533 448 aa19.36■□□□□ 0.69
CHKA-206ENST00000531341 NCF1P14598 390 aaPredicted RBP19.36■□□□□ 0.69
CHKA-206ENST00000531341 CD22P20273 847 aa19.36■□□□□ 0.69
CHKA-206ENST00000531341 ZNF10P21506 573 aaPredicted RBP19.36■□□□□ 0.69
CHKA-206ENST00000531341 HNMTP50135 292 aa19.36■□□□□ 0.69
CHKA-206ENST00000531341 KCNJ2P63252 427 aa19.36■□□□□ 0.69
CHKA-206ENST00000531341 KEAP1Q14145 624 aa19.36■□□□□ 0.69
CHKA-206ENST00000531341 EFTUD2Q15029 972 aaKnown RBP eCLIP19.36■□□□□ 0.692e-17■■■□□ 16.2
CHKA-206ENST00000531341 FBXL19-AS1Q494R0 122 aa19.36■□□□□ 0.69
CHKA-206ENST00000531341 CHSY3Q70JA7 882 aa19.36■□□□□ 0.69
CHKA-206ENST00000531341 KRT78Q8N1N4 520 aa19.36■□□□□ 0.69
CHKA-206ENST00000531341 FBXW8Q8N3Y1 598 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms