RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 BTNL2Q9UIR0 455 aa7.77□□□□□ -1.16
CSDE1-214ENST00000530886 ENTPD4Q9Y227 616 aa7.77□□□□□ -1.16
CSDE1-214ENST00000530886 MED16Q9Y2X0 877 aa7.77□□□□□ -1.16
CSDE1-214ENST00000530886 LCHNA4D1U4 455 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ARRDC5A6NEK1 342 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ARGFXA6NJG6 315 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF729A6NN14 1252 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 J3KR12 359 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ARVCFO00192 962 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 GLP2RO95838 553 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 MYCLP12524 364 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ATP5C1P36542 298 aaKnown RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 PREPP48147 710 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 SULT1E1P49888 294 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 AFF1P51825 1210 aaKnown RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ZP1P60852 638 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 MBTD1Q05BQ5 628 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 IL18Q14116 193 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 DMC1Q14565 340 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 TAF1AQ15573 450 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 CHRNA6Q15825 494 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 SGCAQ16586 387 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 GSG1Q2KHT4 349 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 RTP2Q5QGT7 225 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 HECTD3Q5T447 861 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 DHRS7BQ6IAN0 325 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 MZT2AQ6P582 158 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF551Q7Z340 670 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 PHACTR4Q8IZ21 702 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 KRT78Q8N1N4 520 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 SLC44A3Q8N4M1 653 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 C12orf45Q8N5I9 185 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 PNPLA1Q8N8W4 532 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ADAMTS19Q8TE59 1207 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 EDARADDQ8WWZ3 215 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 GTF3AQ92664 365 aaKnown RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ORAI1Q96D31 301 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 SLC2A13Q96QE2 648 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ZIC5Q96T25 663 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 NELL2Q99435 816 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ACTR6Q9GZN1 396 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 OSER1Q9NX31 292 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 SPHK1Q9NYA1 384 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 GPR160Q9UJ42 338 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 HACL1Q9UJ83 578 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 HCN2Q9UL51 889 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ZAR1LA6NP61 321 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ADAMTS4O75173 837 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 SC5DO75845 299 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF682O95780 498 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 APOC3P02656 99 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 RLN2P04090 185 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 HAPLN1P10915 354 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 FOLR2P14207 255 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 DRD2P14416 443 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 BPIP17213 487 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 UBA1P22314 1058 aaKnown RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 KDELR2P33947 212 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 NR0B1P51843 470 aaKnown RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 EIF4EBP2Q13542 120 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 FAM187BQ17R55 369 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 SLC10A6Q3KNW5 377 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 FAM174BQ3ZCQ3 159 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 EFCAB12Q6NXP0 572 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 USP53Q70EK8 1073 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 RHOUQ7L0Q8 258 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 PIM3Q86V86 326 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 PIAS4Q8N2W9 510 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 MOSPD2Q8NHP6 518 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 WDR20Q8TBZ3 569 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 ZDHHC12Q96GR4 267 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 HSH2DQ96JZ2 352 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 HHIPQ96QV1 700 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 FEVQ99581 238 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 MRPL45Q9BRJ2 306 aaKnown RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 FICDQ9BVA6 458 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 PAPOLGQ9BWT3 736 aaKnown RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 PIGVQ9NUD9 493 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 DNAJC11Q9NVH1 559 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 IMPAD1Q9NX62 359 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 SF3B6Q9Y3B4 125 aaKnown RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 POLR3HQ9Y535 204 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-214ENST00000530886 DNAH12Q6ZR08 3092 aa7.77□□□□□ -1.17
CSDE1-214ENST00000530886 TEX13CA0A0J9YWL9 993 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 A0A1B0GW55 424 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 TCRBV16S1A1N1A0A5B0 115 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 TMEM229AB2RXF0 380 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 HRGP04196 525 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 DUX4L2P0CJ85 424 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 DUX4L3P0CJ86 424 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 DUX4L4P0CJ87 422 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 DUX4L5P0CJ88 424 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 DUX4L6P0CJ89 424 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 DUX4L7P0CJ90 424 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ACSL1P33121 698 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 RPL6Q02878 288 aaKnown RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ACVR1Q04771 509 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 LAMTOR4Q0VGL1 99 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 VEZF1Q14119 521 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 EIF2S3LQ2VIR3 472 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms